YRC Public Data Repository - Protein Structure Prediction

Protein:	DUSP18
Organism:	Homo sapiens
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DUSP18.

Description	E-value	Query Range	Subject Range
DUS18_PONAB - Dual specificity protein phosphatase 18 OS=Pongo abelii GN=DUSP18 PE=2 SV=1 DUS18_PONPY - Dual specificity protein phosphatase 18 - Pongo pygmaeus (Orangutan)	5.0E-46	[1..188]	[1..188]
DUS18_MOUSE - Dual specificity protein phosphatase 18 OS=Mus musculus GN=Dusp18 PE=1 SV=1	1.0E-45	[1..188]	[1..188]
DUS18_RAT - Dual specificity protein phosphatase 18 OS=Rattus norvegicus GN=Dusp18 PE=2 SV=1	1.0E-45	[1..188]	[1..188]
CCDS13883.1_1 - null gi\|67971782 - gi\|67971782\|dbj\|BAE02233.1\| unnamed protein product [Macaca fascicularis] gi\|109093875 - gi\|109093875\|ref\|XP_001110413.1\| PREDICTED: dual specificity phosphatase 18 [Macaca mulatta]	1.0E-45	[1..188]	[1..188]
gi\|26050104 - gi\|26050104\|gb\|AAN77931.1\|AF461689_1 dual-specificity phosphatase-like protein [Homo sapiens]	2.0E-45	[1..188]	[1..188]
gi\|57106012 - gi\|57106012\|ref\|XP_543483.1\| PREDICTED: similar to Dual specificity protein phosphatase 18 (Low mole...	7.0E-44	[1..188]	[1..188]
DUS18_BOVIN - Dual specificity protein phosphatase 18 OS=Bos taurus GN=DUSP18 PE=2 SV=1	1.0E-43	[1..188]	[1..188]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAPSCAFPV QFRQPSVSGL SQITKSLYIS NGVAANNKLM LSSNQITMVI NVSVEVVNTL  60
   61 YEDIQYMQVP VADSPNSRLC DFFDPIADHI HSVEMKQGRT LLHCAAGVSR SAALCLAYLM 120
  121 KYHAMSLLDA HTWTKSCRPI IRPNSGFWEQ LIHYEFQLFG KNTVHMVSSP VGMIPDIYEK 180
  181 EVRLMIPL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	47.221849
Match:	2esbA
Description:	No description for 2esbA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits