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View Structure Prediction Details

Protein: gi|113611139, gi...
Organism: Oryza sativa Japonica Group
Length: 402 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113611139, gi....

Description E-value Query
Range
Subject
Range
PAP12_ARATH - Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana GN=PAP12 PE=2 SV...
478.0 [0..14] [397..35]

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Predicted Domain #1
Region A:
Residues: [1-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAAAAA AGGLLHLGAS RVPSRRPSAG AAPRLRGASC ARGRQPRRRA PPPLAVAAAE  60
   61 EAYTGAETEL LDALAGVQGR GRGVAPRQLE EVESAVQALE ALGGLPDPTN SSLIEGSWQL 120
  121 IFTTRPGSAS PIQRTFVGVD SFKIFQEVYL RTDDPRVINV VKFSESIGEL KVEAEATIED 180
  181 GKRILFRFDR AAFNFKFLPF KVPYPVPFKL LGDEAKGWLD TTYLSQTGNI RISRGNKGTT 240
  241 FVLQKSA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 59.468521
Match: PF04755.3
Description: No description for PF04755.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [248-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQRQLLLSAI SAGTGVKEAI DDLTSSRQGI EADLNTLAGE WQLLWSSKTE DESWSFVASA  60
   61 GLKGVQIIKE DGQLKNLVRP FPGVSLNASG NICKNEDGNN FNLSINKGAI QAGGLQFPLD 120
  121 ARGEFAMEIL YIDNKIRISN INQHKLVHVR IANRT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle