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View Structure Prediction Details

Protein: gi|119615292, gi...
Organism: Homo sapiens
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119615292, gi....

Description E-value Query
Range
Subject
Range
gi|34526924 - gi|34526924|dbj|BAC85298.1| unnamed protein product [Homo sapiens]
6.0E-56 [1..226] [66..291]
gi|114554372 - gi|114554372|ref|XP_001159111.1| PREDICTED: PQ loop repeat containing 2 [Pan troglodytes]
2.0E-55 [1..226] [66..291]
gi|108998563, gi... - gi|108998566|ref|XP_001092870.1| PREDICTED: similar to PQ loop repeat containing 2 isoform 4 [Macaca...
6.0E-55 [1..224] [66..289]
LAAT1_RAT - Lysosomal amino acid transporter 1 homolog OS=Rattus norvegicus GN=Pqlc2 PE=1 SV=1
3.0E-54 [1..226] [66..293]
LAAT1_MOUSE - Lysosomal amino acid transporter 1 homolog OS=Mus musculus GN=Pqlc2 PE=2 SV=1
3.0E-52 [1..226] [66..293]
gi|76610493 - gi|76610493|ref|XP_590540.2| PREDICTED: similar to PQ loop repeat containing 2 [Bos taurus]
5.0E-48 [1..212] [155..364]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQALSLWFL LGWIGGDSCN LIGSFLADQL PLQTYTAVYY VLADLVMLTL YFYYKFRTRP  60
   61 SLLSAPINSV LLFLMGMACA TPLLSAAGPV AAPREAFRGR ALLSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESGSKPFTRQ EVIGFVIGSI SSVLYLLSRL PQIRTNFLRK STQGISYSLF ALVMLGNTLY  60
   61 GLSVLLKNPE EGQSEGSYLL HHLPWLVGSL GVLLLDTIIS IQFLVYRRST AASELEPLLP 120
  121 S

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.552842
Match: PF04193.5
Description: No description for PF04193.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle