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View Structure Prediction Details

Protein: gi|115461913, gi...
Organism: Oryza sativa Japonica Group
Length: 669 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115461913, gi....

Description E-value Query
Range
Subject
Range
gi|17505198, gi|... - gi|5702202|gb|AAD47199.1|AF129166_1 long-chain acyl-CoA synthetase 5 [Homo sapiens], ref|NP_056071.1...
558.0 [0..8] [657..36]

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Predicted Domain #1
Region A:
Residues: [1-669]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGTKKVFT VQVEDGKPRK DGRPAVGPVF RSALSKDGFP PLEPDMKTSW DVFRVAAGKY  60
   61 PDNRMLGWRP VKDGVIGPYI WKSYREVYEE VLQVGSALQQ LGVKPGSRIG IYGSNCPQWI 120
  121 VAMQACNGYS LICVPLYDTL GAGAVDFIID HAEIDVIFVQ DKKIKEILSA NCKSAKRVKG 180
  181 LVAFTSGTSE EITSADQIGM KLYSWKDFLK MGKENPAQPC APKPNDTCTI MYTSGTSGEP 240
  241 KGVMLSHESH AIYVKGVDLF MEQFDDKMTT DDVFLSFLPL AHILDRMIEE FFFHKGASVG 300
  301 YYHGDLNALR DDLMELKPTL LVGVPRVYEK IYEGILKALS ELRPLRRLIF NALYNRKLAN 360
  361 MKAGCTHKTA SPFADMLAFR KVKARLGGRL RLLISGGAPL SNEIEEFLRV TSCAYFIQGY 420
  421 GLTETLGPST VCYPDDMSLV GTVGVAATYT ELRLEEVPEM GYNPLGTPSR GEICVRGNFF 480
  481 TGYYKNPELT NEVMADGWFH TGDIGEMNSD GILKVIDRKK NIFKLSQGEY VAVEYLEKVY 540
  541 VFPPTVEDVW VYGDSFRSML VAVVNPHEEN TMKWAESNGC KGSFAEICKS EGLKEHILKE 600
  601 LQSVAAKNKL RGFEYVKGVI LDPIPFDLER DLVTATMKKK RNNMLKYYKP EIEKVYQKLE 660
  661 EQRVAAKSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 138.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle