| Protein: | gi|115460588, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1183 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|115460588, gi....
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Region A: Residues: [1-727] |
1 11 21 31 41 51
| | | | | |
1 MERNKFASKM SQHYTKTICI AVVLVAVLFS LSSAAAAGSG AAVSVQLEAL LEFKNGVADD 60
61 PLGVLAGWRV GKSGDGAVRG GALPRHCNWT GVACDGAGQV TSIQLPESKL RGALSPFLGN 120
121 ISTLQVIDLT SNAFAGGIPP QLGRLGELEQ LVVSSNYFAG GIPSSLCNCS AMWALALNVN 180
181 NLTGAIPSCI GDLSNLEIFE AYLNNLDGEL PPSMAKLKGI MVVDLSCNQL SGSIPPEIGD 240
241 LSNLQILQLY ENRFSGHIPR ELGRCKNLTL LNIFSNGFTG EIPGELGELT NLEVMRLYKN 300
301 ALTSEIPRSL RRCVSLLNLD LSMNQLAGPI PPELGELPSL QRLSLHANRL AGTVPASLTN 360
361 LVNLTILELS ENHLSGPLPA SIGSLRNLRR LIVQNNSLSG QIPASISNCT QLANASMSFN 420
421 LFSGPLPAGL GRLQSLMFLS LGQNSLAGDI PDDLFDCGQL QKLDLSENSF TGGLSRLVGQ 480
481 LGNLTVLQLQ GNALSGEIPE EIGNMTKLIS LKLGRNRFAG HVPASISNMS SLQLLDLGHN 540
541 RLDGVFPAEV FELRQLTILG AGSNRFAGPI PDAVANLRSL SFLDLSSNML NGTVPAALGR 600
601 LDQLLTLDLS HNRLAGAIPG AVIASMSNVQ MYLNLSNNAF TGAIPAEIGG LVMVQTIDLS 660
661 NNQLSGGVPA TLAGCKNLYS LDLSGNSLTG ELPANLFPQL DLLTTLNISG NDLDGEIPAD 720
721 IAALKHI
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| Detection Method: |  |
| Confidence: | 72.154902 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [728-876] |
1 11 21 31 41 51
| | | | | |
1 QTLDVSRNAF AGAIPPALAN LTALRSLNLS SNTFEGPVPD GGVFRNLTMS SLQGNAGLCG 60
61 GKLLAPCHGH AAGKKRVFSR TGLVILVVLI ALSTLLLLMV ATILLVSYRR YRRKRRAADI 120
121 AGDSPEAAVV VPELRRFSYG QLAAATNSF
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| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [877-1183] |
1 11 21 31 41 51
| | | | | |
1 DQGNVIGSSN LSTVYKGVLA GDADGGMVVA VKRLNLEQFP SKSDKCFLTE LATLSRLRHK 60
61 NLARVVGYAW EAGKIKALVL DYMVNGDLDG AIHGGAAAPP PAPSRWTVRE RLRVCVSVAH 120
121 GLVYLHSGYD FPVVHCDVKP SNVLLDGDWE ARVSDFGTAR MLGVHLPAAA NAAAQSTATS 180
181 SAFRGTVGYM APEFAYMRTV STKVDVFSFG VLAMELFTGR RPTGTIEEDG VPLTLQQLVD 240
241 NAVSRGLDGV HAVLDPRMKV ATEADLSTAA DVLAVALSCA AFEPADRPDM GAVLSSLLKM 300
301 SKLVGED
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| Detection Method: | |
| Confidence: | 50.69897 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
