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View Structure Prediction Details

Protein: gi|113565303, gi...
Organism: Oryza sativa Japonica Group
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113565303, gi....

Description E-value Query
Range
Subject
Range
gi|49900500, gi|... - gi|68364030|ref|XP_686385.1| PREDICTED: hypothetical protein isoform 1 [Danio rerio], gi|50539966|re...
188.0 [0..3] [156..5]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVGLINANP VVYEKKERRS RQAPETTDEN AAEAIDQLEI FDHIRDIKDP EHPYSLEELN  60
   61 VVTEDSVEIN DELSHVRVTF TPTVERCSMA TVIGLCLRVK LMRSLPPRYK VDIRVAPGSH 120
  121 ATETAVNKQL NDKERVAAAL ENPNLLDIVE ECLSPTFA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.30103
Match: 1uwdA
Description: Conserved Hypothetical Protein TM0487 from Thermotoga maritima
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.5354876167489 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle