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View Structure Prediction Details

Protein: gi|215767269, gi...
Organism: Oryza sativa Japonica Group
Length: 207 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215767269, gi....

Description E-value Query
Range
Subject
Range
gi|73983524 - gi|73983524|ref|XP_533278.2| PREDICTED: similar to Mitotic spindle assembly checkpoint protein MAD2A...
266.0 [0..1] [205..1]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRTASKDI ITLRGSAAIV SEFFGYAANS ILYNRGVYPE ESFTKVKKYG LTMLLTQDEG  60
   61 VKTFIANLNT QLSEWLEAGK LQRIVLVIMS KATSEVLERW NFSIQTDPEV VDKGVIKEKS 120
  121 DKEIMREIQA IMRQVASCIT YLPCLDEPCI FDVLAYTDMD VAVPFTWVES DAKLIENPQM 180
  181 VKLHSFDTKI HKVDTLVSYK VDEWDEE

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Detection Method: PSI-BLAST
Confidence: 70.39794
Match: 1s2hA
Description: The Mad2 spindle checkpoint protein possesses two distinct natively folded states
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.14424444268625 bayes_pls_golite062009
protein binding 0.856075580719879 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle