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View Structure Prediction Details

Protein: gi|113564697, gi...
Organism: Oryza sativa Japonica Group
Length: 662 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113564697, gi....

Description E-value Query
Range
Subject
Range
gi|38345333, gi|... - gi|50925257|ref|XP_472930.1| OSJNBa0081L15.6 [Oryza sativa (japonica cultivar-group)], gi|38345333|e...
457.0 [0..1] [662..1]

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Predicted Domain #1
Region A:
Residues: [1-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKQKKPRK GKEKTERKTA KGEEKRARRE ARKVGEEDDI DAILRSIQKE EAKKKEVHID  60
   61 ENVPAPSPRS NCSLTINPLK DTELVLYGGE FYNGSKTFVY GDLYRYDVEK NEWKLVSSPN 120
  121 SPPPRSAHQT VAWKNNIYMF GGEFTSPNQE RFHHYKDFWS LDLKTNQWEQ ILAKGCPSAR 180
  181 SGHRMVLYKH KIVLFGGFYD TLREVRYYND LHVFDLDNFK WEEIKPRPGC LWPSPRSGFQ 240
  241 LMVYQDQIYL YGGYFKEVVS SDKSASEKGT VHADMWTLDP RTWEWNKVKK TGMPPGPRAG 300
  301 FSMCVHKKRA VLFGGVVDME IEGDVIMSMF MNELYGFQLD NHRWYPLELR KDKPAKNKTK 360
  361 DIKRKEP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.522879
Match: 1x2jA
Description: Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [368-567]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNNVEDNLGN EEDEIMEDSE TTGGQSEVHG VSNHLTKSLT LNKAGSGNSS DILSDSTTQE  60
   61 VLPEAVKPGG RINACLAVGK DTLYLYGGMM ELKDREITLD DMYSLNLSKL DEWKCIIPAS 120
  121 ESEWLEISED EDDEDDDDDD NENDSEDDAN QTDEDDEESD EDAEKNVDMS TAVSLIKGER 180
  181 KNLRRKEKRA RIEQIRVMLG 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.5
Match: 2dyhA
Description: No description for 2dyhA was found.

Predicted Domain #3
Region A:
Residues: [568-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSDSQRTPMP GESLKDFYKR TDMYWQMAAY EHTQHTGKEL RKDGFDLAET RYKELKPILD  60
   61 ELAVLEAEQK AEEEASASTS SKKDTRKSKQ KSGMR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle