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View Structure Prediction Details

Protein: gi|113564164, gi...
Organism: Oryza sativa Japonica Group
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113564164, gi....

Description E-value Query
Range
Subject
Range
gi|21436469, gi|... - gi|9294659|dbj|BAB03008.1| HAPp48,5 protein [Arabidopsis thaliana], gi|21436469|gb|AAM51435.1| putat...
565.0 [0..5] [407..1]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETLAEDAA DAPLDAAAIR SRLERLALSR RGEEEVASAA AAAADAVRRL PSVEDVEPLQ  60
   61 GLEFDAWASS AAPMES

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DFDAFMEWLS KEVSLAEEEN RKLSVEISSV AETTLKDSIQ LDADIAELES SLKKIDSQGL  60
   61 KHLEASHIAE LSVSTDSCRD QIKFDKDYKY EVLELNQQLE KYENDLKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [185-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LENQKSAEAM WELESMLSEA NVLDFKDNCL RVFLKEAVLT PECLMYGKES DCSVNSFVSD  60
   61 HELLIEVGEN MEPKKVQIFP DDTCVDILLD KLKASRETIS TTSLGWIIRQ FQHHIIINTL 120
  121 RRSLVKDANN SRHSFEYIDK DGTILAHLAG GIDAFIKISA DWPLSSCGLK LISIHSSRAQ 180
  181 SADISLALLS KTKELANGLE LQTRRHLVKF VDAIEDILFR EMRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle