YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|215712321, gi...
Organism:	Oryza sativa Japonica Group
Length:	463 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215712321, gi....

Description	E-value	Query Range	Subject Range
TGD4_ARATH - Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic OS=Arabidopsis thaliana GN=TGD4 PE=1 SV=1	491.0	[0..2]	[463..1]

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Predicted Domain #1

Region A:
Residues: [1-297]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRMRWMAD GDGRWELDVE TPATMEGAAR PVPGDPLPLG LSRGPRVTRT KQLDFLHRFM  60
   61 ASPLVPSFSA SGAGLSVHHA HLVHLAHNLS FTILEQLHVQ KLVAVVKEKL SNRQEVSWSN 120
  121 DIKRHLHDVM SLGVGTELLI TPDTTLLLEL YNLKKGDRGK AIFRHKLPHQ NITLEASWPG 180
  181 LFIDKNGVYW DVPLSLSADL ASVGSESGLS YHVLLQQNSG EPKCFGGGEE TSDVPVALLP 240
  241 GLCAKAAVSI KKSIDVWRKK EDKLKNVQPY DVFLSEPHVS FTGIIGAVAS GSFGDCS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [298-463]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRMSMQNEIL KSNAFKYFDE RNKFAAFADL FASVNFTAQH GNFQRLLLDL TRVSARLDIS  60
   61 SGSLFLRGAS QLAQDFFFSR RPDLETFCDV CPDVIVSLQQ QIVGPFSFRV ESTVTIDPKK 120
  121 QDHFVRVDDS VFAIDWALKV LGSAKATAWY SPKHQEAMVE LRFFET