| Protein: | SRP68 |
| Organism: | Homo sapiens |
| Length: | 627 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRP68.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [36..627] | [28..619] |
|
|
0.0 | [36..627] | [31..622] |
|
|
0.0 | [36..627] | [35..625] |
|
|
0.0 | [36..627] | [35..625] |
|
|
0.0 | [36..627] | [36..626] |
|
|
0.0 | [36..627] | [27..616] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MAAEKQVPGG GGGGGSGGGG GSGGGGSGGG RGAGGEENKE NERPSAGSKA NKEFGDSLSL 60
61 EILQIIKESQ QQHGLRHGDF QRYRGYCSRR QRRLRKTLNF KMGNRHKFTG KKVTEELLTD 120
121 NRYLLLVLMD AERAWSYAMQ LKQEANTEPR KRFHLLSRLR KAVKHAEELE RLCESNRVDA 180
181 KTKLEAQAYT AYLSGMLRFE HQEWKAAIEA FNKCKTIYEK LASA
|
| Detection Method: |  |
| Confidence: | 1.02 |
| Match: | 1s72L |
| Description: | REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [225-369] |
1 11 21 31 41 51
| | | | | |
1 FTEEQAVLYN QRVEEISPNI RYCAYNIGDQ SAINELMQMR LRSGGTEGLL AEKLEALITQ 60
61 TRAKQAATMS EVEWRGRTVP VKIDKVRIFL LGLADNEAAI VQAESEETKE RLFESMLSEC 120
121 RDAIQVVREE LKPDQKQRDY ILEGE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [370-464] |
1 11 21 31 41 51
| | | | | |
1 PGKVSNLQYL HSYLTYIKLS TAIKRNENMA KGLQRALLQQ QPEDDSKRSP RPQDLIRLYD 60
61 IILQNLVELL QLPGLEEDKA FQKEIGLKTL VFKAY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [465-627] |
1 11 21 31 41 51
| | | | | |
1 RCFFIAQSYV LVKKWSEALV LYDRVLKYAN EVNSDAGAFK NSLKDLPDVQ ELITQVRSEK 60
61 CSLQAAAILD ANDAHQTETS SSQVKDNKPL VERFETFCLD PSLVTKQANL VHFPPGFQPI 120
121 PCKPLFFDLA LNHVAFPPLE DKLEQKTKSG LTGYIKGIFG FRS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
