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View Structure Prediction Details

Protein: RS16_BARHE
Organism: Bartonella henselae
Length: 127 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS16_BARHE.

Description E-value Query
Range
Subject
Range
RS16_BARQU - 30S ribosomal protein S16 OS=Bartonella quintana GN=rpsP PE=3 SV=1
RS16_BARQU - 30S ribosomal protein S16 OS=Bartonella quintana (strain Toulouse) GN=rpsP PE=3 SV=1
156.0 [0..1] [123..1]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKIRLSRG GSKKRPYYHI IVADARSPRD GRFLERVGAW DPMLPKDGPR VKLNEERIQY  60
   61 WLGQGAQPTD RVLRFLDAAG LKKRPTRNNP HKGEPGKKAQ ERIAAAKQAA EEAAAAKTES 120
  121 APISEEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.221849
Match: 1pnsP
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle