| Protein: | RPN2 |
| Organism: | Homo sapiens |
| Length: | 631 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPN2.
| Description | E-value | Query Range |
Subject Range |
|
|
961.0 | [0..1] | [631..1] |
|
|
950.0 | [0..1] | [631..1] |
|
|
926.0 | [0..1] | [631..1] |
|
|
924.0 | [0..1] | [631..1] |
|
|
922.0 | [0..1] | [631..1] |
|
|
918.0 | [0..1] | [631..1] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MAPPGSSTVF LLALTIIAST WALTPTHYLT KHDVERLKAS LDRPFTNLES AFYSIVGLSS 60
61 LGAQVPDAKK ACTYIRSNLD PSNVDSLFYA AQASQALSGC EISISNETKD LLLAAVSEDS 120
121 SVTQIYHAVA ALSGFGL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.855 | a.118.8 | TPR-like |
| View | Download | 0.634 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.634 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.632 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.602 | a.118.1 | ARM repeat |
| View | Download | 0.582 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.574 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.525 | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.513 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
|
Region A: Residues: [138-355] |
1 11 21 31 41 51
| | | | | |
1 PLASQEALSA LTARLSKEET VLATVQALQT ASHLSQQADL RSIVEEIEDL VARLDELGGV 60
61 YLQFEEGLET TALFVAATYK LMDHVGTEPS IKEDQVIQLM NAIFSKKNFE SLSEAFSVAS 120
121 AAAVLSHNRY HVPVVVVPEG SASDTHEQAI LRLQVTNVLS QPLTQATVKL EHAKSVASRA 180
181 TVLQKTSFTP VGDVFELNFM NVKFSSGYYD FLVEVEGD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [356-425] |
1 11 21 31 41 51
| | | | | |
1 NRYIANTVEL RVKISTEVGI TNVDLSTVDK DQSIAPKTTR VTYPAKAKGT FIADSHQNFA 60
61 LFFQLVDVNT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.866 | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.860 | d.17.1 | Cystatin/monellin |
| View | Download | 0.858 | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.820 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.781 | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.778 | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.764 | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.759 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.722 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.712 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.668 | g.41.17 | Description not found. |
| View | Download | 0.572 | g.41.17 | Description not found. |
| View | Download | 0.561 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.524 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.509 | d.9.1 | Interleukin 8-like chemokines |
|
Region A: Residues: [426-516] |
1 11 21 31 41 51
| | | | | |
1 GAELTPHQTF VRLHNQKTGQ EVVFVAEPDN KNVYKFELDT SERKIEFDSA SGTYTLYLII 60
61 GDATLKNPIL WNVADVVIKF PEEEAPSTVL S
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.729 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.721 | d.354.1 | Description not found. |
| View | Download | 0.699 | d.224.1 | SufE-like |
| View | Download | 0.680 | d.129.6 | Description not found. |
| View | Download | 0.669 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.537 | d.93.1 | SH2 domain |
| View | Download | 0.503 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.445 | d.93.1 | SH2 domain |
| View | Download | 0.436 | d.45.1 | ClpS-like |
| View | Download | 0.373 | b.1.18 | E set domains |
| View | Download | 0.342 | d.214.1 | Hypothetical protein MTH1880 |
| View | Download | 0.317 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.292 | d.45.1 | ClpS-like |
|
Region A: Residues: [517-631] |
1 11 21 31 41 51
| | | | | |
1 QNLFTPKQEI QHLFREPEKR PPTVVSNTFT ALILSPLLLL FALWIRIGAN VSNFTFAPST 60
61 IIFHLGHAAM LGLMYVYWTQ LNMFQTLKYL AILGSVTFLA GNRMLAQQAV KRTAH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
