| Protein: | TNFSF10 |
| Organism: | Homo sapiens |
| Length: | 281 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TNFSF10.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-98 | [1..281] | [1..281] |
|
|
1.0E-97 | [1..281] | [1..281] |
|
|
1.0E-94 | [1..281] | [1..281] |
|
|
1.0E-94 | [1..278] | [1..279] |
|
|
5.0E-86 | [1..281] | [1..289] |
|
|
2.0E-83 | [12..280] | [16..290] |
|
|
3.0E-78 | [6..280] | [3..290] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MAMMEVQGGP SLGQTCVLIV IFTVLLQSLC VAVTYVYFTN ELKQMQDKYS KSGIACFLKE 60
61 DDSYWDPNDE ESMNSPCWQV KWQLRQLVRK MI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [93-281] |
1 11 21 31 41 51
| | | | | |
1 LRTSEETIST VQEKQQNISP LVRERGPQRV AAHITGTRGR SNTLSSPNSK NEKALGRKIN 60
61 SWESSRSGHS FLSNLHLRNG ELVIHEKGFY YIYSQTYFRF QEEIKENTKN DKQMVQYIYK 120
121 YTSYPDPILL MKSARNSCWS KDAEYGLYSI YQGGIFELKE NDRIFVSVTN EHLIDMDHEA 180
181 SFFGAFLVG
|
| Detection Method: | |
| Confidence: | 60.69897 |
| Match: | 1dg6A |
| Description: | Apoptosis-2 ligand, apo2l/TRAIL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| CD40 receptor binding | 3.4607762965927 | bayes_pls_golite062009 |
| receptor binding | 3.37824597039547 | bayes_pls_golite062009 |
| tumor necrosis factor receptor superfamily binding | 3.27382150819697 | bayes_pls_golite062009 |
| protein binding | 2.25413201891408 | bayes_pls_golite062009 |
| binding | 1.55055236820725 | bayes_pls_golite062009 |
| cytokine activity | 1.44696622202601 | bayes_pls_golite062009 |
| cell surface binding | 1.12145675554147 | bayes_pls_golite062009 |
| tumor necrosis factor receptor binding | 0.83659914028185 | bayes_pls_golite062009 |
| eukaryotic cell surface binding | 0.3981620493951 | bayes_pls_golite062009 |
