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View Structure Prediction Details

Protein: TSPYL2
Organism: Homo sapiens
Length: 693 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TSPYL2.

Description E-value Query
Range
Subject
Range
gi|113430446 - gi|113430446|ref|XP_001128695.1| PREDICTED: similar to TSPY-like 2 [Homo sapiens]
4.0E-98 [50..693] [52..695]
gi|12858539 - gi|12858539|dbj|BAB31351.1| unnamed protein product [Mus musculus]
1.0E-97 [1..407] [1..400]
gi|67971218 - gi|67971218|dbj|BAE01951.1| unnamed protein product [Macaca fascicularis]
1.0E-95 [1..693] [1..695]
gi|114577374 - gi|114577374|ref|XP_001152621.1| PREDICTED: hypothetical protein [Pan troglodytes]
3.0E-89 [26..403] [4..385]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRPDEGPPA KTRRLSSSES PQRDPPPPPP PPPLLRLPLP PPQQRPRLQE ETEAAQVLAD  60
   61 MRGVGLGPAL PPPPPYVILE EGGIRAYFTL GAECPGWDST IESGYGEAPP PTESLEALPT 120
  121 PEASGGSLEI DFQVVQSSSF GGEGALETCS AVGWAPQRLV DP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSKEEAIIIV EDEDEDERES MRSSRRRRRR RRRKQRKVKR ESRERNAERM ESILQALEDI  60
   61 QLDLEAVNIK AGKAFLRLKR KFIQMRRPFL ERRDLIIQHI PGFWVKAFLN HPRISILINR 120
  121 RDEDIFRYLT NLQVQDLRHI SMGYKMKLYF QTNPYFTNMV IVKEFQRNRS GRLVSHSTPI 180
  181 RWHRGQEPQA RRHGNQDASH SFFSWFSNHS LPEADRIAEI IKNDLWVNPL RYYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.0
Match: 2e50A
Description: No description for 2e50A was found.

Predicted Domain #3
Region A:
Residues: [397-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RERGSRIKRK KQEMKKRKTR GRCEVVIMED APDYYAVEDI FSEISDIDET IHDIKISDFM  60
   61 ETTDYFETTD NEITDINENI CDSENPDHNE VP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [489-693]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNETTDNNES ADDHETTDNN ESADDNNENP EDNNKNTDDN EENPNNNENT YGNNFFKGGF  60
   61 WGSHGNNQDS SDSDNEADEA SDDEDNDGNE GDNEGSDDDG NEGDNEGSDD DDRDIEYYEK 120
  121 VIEDFDKDQA DYEDVIEIIS DESVEEEGIE EGIQQDEDIY EEGNYEEEGS EDVWEEGEDS 180
  181 DDSDLEDVLQ VPNGWANPGK RGKTG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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