YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: HSPB1
Organism: Homo sapiens
Length: 205 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HSPB1.

Description E-value Query
Range
Subject
Range
gi|54696636, gi|... - gi|61365790|gb|AAX42764.1| heat shock 27kDa protein 1 [synthetic construct], gi|54696636|gb|AAV38690...
9.0E-50 [1..205] [1..205]
gi|15126735 - gi|15126735|gb|AAH12292.1| Heat shock 27kDa protein 1 [Homo sapiens]
7.0E-49 [1..205] [1..205]
gi|40795763 - gi|40795763|gb|AAR91597.1| intracellular estradiol-binding protein [Saguinus oedipus]
4.0E-47 [1..205] [1..202]
HSPB1_PIG - Heat shock protein beta-1 OS=Sus scrofa GN=HSPB1 PE=2 SV=1
gi|55668280 - gb|AAV54182.1| Hsp27 [Sus scrofa]
6.0E-46 [1..205] [1..207]
HSPB1_MOUSE - Heat shock protein beta-1 OS=Mus musculus GN=Hspb1 PE=1 SV=3
6.0E-46 [1..205] [1..209]
HSPB1_BOVIN - Heat shock protein beta-1 OS=Bos taurus GN=HSPB1 PE=2 SV=1
7.0E-45 [1..205] [1..201]

Back

Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTERRVPFSL LRGPSWDPFR DWYPHSRLFD QAFGLPRLPE EWSQWLGGSS WPGYVRPLPP  60
   61 AAIESPAVAA PAYSRALSRQ LSSGVSEIRH TADRWRVSLD VNHFAPDELT VKTKDGVVEI 120
  121 TGKHEERQDE HGYISRCFTR KYTLPPGVDP TQVSSSLSPE GTLTVEAPMP KLATQSNEIT 180
  181 IPVTFESRAQ LGGPEAAKSD ETAAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.69897
Match: 2bolA
Description: CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle