YRC Public Data Repository - Protein Structure Prediction

Protein:	DNLZ
Organism:	Homo sapiens
Length:	178 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNLZ.

Description	E-value	Query Range	Subject Range
gi\|114627557 - gi\|114627557\|ref\|XP_520365.2\| PREDICTED: similar to OTTHUMP00000022587 [Pan troglodytes]	1.0E-83	[1..178]	[1..178]
gi\|109469628, gi... - gi\|34853079\|ref\|XP_216011.2\| PREDICTED: similar to CG12379-PA [Rattus norvegicus], gi\|109469628\|ref\|...	3.0E-83	[1..178]	[51..223]
DNLZ_MOUSE - DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=1 SV=1	5.0E-81	[1..178]	[1..177]
gi\|109109820 - gi\|109109820\|ref\|XP_001117966.1\| PREDICTED: similar to CG12379-PA [Macaca mulatta]	2.0E-80	[1..178]	[1..178]
gi\|76676986 - gi\|76676986\|ref\|XP_591925.2\| PREDICTED: similar to CG12379-PA [Bos taurus]	7.0E-66	[1..178]	[46..214]
gi\|73967558 - gi\|73967558\|ref\|XP_849286.1\| PREDICTED: similar to CG12379-PA [Canis familiaris]	4.0E-60	[1..178]	[1..171]
gi\|44982461 - gi\|44982461\|gb\|AAS51747.1\| ADL173Cp [Ashbya gossypii ATCC 10895] gi\|44982461, gi\|... - gi\|45187700\|ref\|NP_983923.1\| ADL173Cp [Ashbya gossypii ATCC 10895], gi\|44982461\|gb\|AAS51747.1\| ADL17...	4.0E-41	[63..166]	[65..166]
gi\|47219865 - gi\|47219865\|emb\|CAF97135.1\| unnamed protein product [Tetraodon nigroviridis]	7.0E-39	[61..150]	[1..90]
gi\|116126281, gi... - gi\|118786355\|ref\|XP_315385.3\| ENSANGP00000021116 [Anopheles gambiae str. PEST], gi\|116126281\|gb\|EAA1...	7.0E-39	[31..134]	[23..135]
gi\|49656714, gi\|... - gi\|50424909\|ref\|XP_461045.1\| hypothetical protein DEHA0F17072g [Debaryomyces hansenii CBS767], gi\|49...	2.0E-38	[48..166]	[43..159]

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Predicted Domain #1

Region A:
Residues: [1-178]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTALRGAP RLLSRVQPRA PCLRRLWGRG ARPEVAGRRR AWAWGWRRSS SEQGPGPAAA  60
   61 LGRVEAAHYQ LVYTCKVCGT RSSKRISKLA YHQGVVIVTC PGCQNHHIIA DNLGWFSDLN 120
  121 GKRNIEEILT ARGEQVHRVA GEGALELVLE AAGAPTSTAA PEAGEDEGPP SPGKTEPS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.30103
Match:	2e2zA
Description:	No description for 2e2zA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits