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View Structure Prediction Details

Protein: him-1
Organism: Caenorhabditis elegans
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for him-1.

Description E-value Query
Range
Subject
Range
gi|82724967, gi|... - gi|82747099|ref|ZP_00909599.1| ATPas [Clostridium beijerincki NCIMB 8052], gi|82724967|gb|EAP59716.1...
177.0 [0..2] [131..111]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEPYLDGIQ YNCVAPGKRF RPMDNLSGGE KTIAALALLF AVHGRNPAPF FVLDEIDAAL  60
   61 DNTNIGKVAS YICESAREHM QIIVISLKEE FYNKADSLIG IFPYPAACTT SGVLTFDLTR 120
  121 FKQIGLNEMT ENPPTPSIAT 

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Detection Method: PSI-BLAST
Confidence: 11.0
Match: 1w1wA
Description: Sc Smc1hd:Scc1-C complex, ATPgS
Matching Structure (courtesy of the PDB):

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