YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|21070978, gi\|...
Organism:	Homo sapiens
Length:	186 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21070978, gi|....

Description	E-value	Query Range	Subject Range
gi\|114647540 - gi\|114647540\|ref\|XP_001150587.1\| PREDICTED: similar to Smac [Pan troglodytes]	4.0E-90	[8..186]	[190..368]
gi\|109099086 - gi\|109099086\|ref\|XP_001097400.1\| PREDICTED: diablo homolog (Drosophila) isoform 5 [Macaca mulatta]	9.0E-83	[8..186]	[61..239]
DBLOH_PONPY - Diablo homolog, mitochondrial precursor - Pongo pygmaeus (Orangutan) DBLOH_PONAB - Diablo homolog, mitochondrial OS=Pongo abelii GN=DIABLO PE=2 SV=1	1.0E-80	[8..186]	[61..239]
gi\|10437144 - gi\|10437144\|dbj\|BAB14994.1\| unnamed protein product [Homo sapiens]	2.0E-80	[8..186]	[61..239]
DBLOH_MOUSE, DBO... - (Q9JIQ3) Diablo homolog, mitochondrial precursor (Second mitochondria-derived activator of caspase) ...	8.0E-80	[8..186]	[59..237]
gi\|119331166, gi... - gi\|73994503\|ref\|XP_849730.1\| PREDICTED: similar to Diablo homolog, mitochondrial precursor (Second m...	4.0E-79	[8..186]	[59..237]

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Predicted Domain #1

Region A:
Residues: [1-186]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSDFYFQKS EPHSLSSEAL MRRAVSLVTD STSTFLSQTT YALIEAITEY TKAVYTLTSL  60
   61 YRQYTSLLGK MNSEEEDEVW QVIIGARAEM TSKHQEYLKL ETTWMTAVGL SEMAAEAAYQ 120
  121 TGADQASITA RNHIQLVKLQ VEEVHQLSRK AETKLAEAQI EELRQKTQEE GEERAESEQE 180
  181 AYLRED

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Detection Method:	PSI-BLAST
Confidence:	71.30103
Match:	1fewA
Description:	Smac/diablo
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits