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View Structure Prediction Details

Protein: RCN1
Organism: Homo sapiens
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCN1.

Description E-value Query
Range
Subject
Range
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
3.0E-43 [159..311] [511..658]
gi|94471603 - gi|94471603|gb|ABF21069.1| mitochondrial calcium sensor cameleon 4mtD3cpv [synthetic construct]
3.0E-40 [159..311] [362..509]
gi|76628526 - gi|76628526|ref|XP_874377.1| PREDICTED: similar to calmodulin 1 [Bos taurus]
6.0E-37 [151..311] [68..223]
gi|114677917 - gi|114677917|ref|XP_512771.2| PREDICTED: similar to calmodulin [Pan troglodytes]
2.0E-36 [130..311] [93..269]

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Predicted Domain #1
Region A:
Residues: [1-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGGRGRRL GLALGLLLAL VLAPRVLRAK PTVRKERVVR PDSELGERPP EDNQSFQYDH  60
   61 EAFLGKEDSK TFDQLTPDES KERLGKIVDR IDNDGDGFVT TEELKTWIKR VQKRYIFDNV 120
  121 AKVWKDYDRD KDDKISWEEY KQATYGYYLG NPAEFHDSSD HHTFKKMLPR DERRFKAADL 180
  181 NGDLTATREE FTAFLHPEEF EHMKEIVVLE TLEDIDKNGD GFVDQDEYIA DMFSHEENGP 240
  241 EPDWVLSERE QFNEFRDLNK DGKLDKDEIR HWILPQDYDH AQAEARHLVY ESDKNKDEKL 300
  301 TKEEILENWN MFVGSQATNY GEDLTKNHDE L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 1sjjA
Description: Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle