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View Structure Prediction Details

Protein: gi|809130, gi|80...
Organism: Homo sapiens
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|809130, gi|80....

Description E-value Query
Range
Subject
Range
gi|115394126 - gi|115394126|gb|ABI97018.1| anti-Burkholderia mallei scFv antibody [synthetic construct]
189.0 [0..1] [108..112]
gi|21669365 - gi|21669365|dbj|BAC01707.1| immunoglobulin kappa light chain VLJ region [Homo sapiens]
187.0 [0..1] [108..23]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIQMTQSPSS LSASVGDRVT ITCRASQDIT NYVNWFQQRP GQAPKVLIYG ASILETGVPS  60
   61 RFSGSGSGTD FTFTISSLQP EDIATYYCQQ YDTLPLTFGG GTKVDIKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.09691
Match: 2fgwL
Description: Immunoglobulin light chain kappa variable domain, VL-kappa; Immunoglobulin light chain kappa constant domain, CL-kappa
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle