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View Structure Prediction Details

Protein: gi|119586232, gi...
Organism: Homo sapiens
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119586232, gi....

Description E-value Query
Range
Subject
Range
gi|55640643 - gi|55640643|ref|XP_509917.1| PREDICTED: SMN-interacting protein 1 isoform 5 [Pan troglodytes]
SIP1 - survival of motor neuron protein interacting protein 1
0.0 [1..265] [1..280]
GEMI2_MOUSE - Gem-associated protein 2 OS=Mus musculus GN=Gemin2 PE=2 SV=1
0.0 [12..265] [1..269]
gi|109083415 - gi|109083415|ref|XP_001092592.1| PREDICTED: similar to SMN-interacting protein 1 isoform beta isofor...
0.0 [12..265] [1..254]
GEMI2_RAT - Gem-associated protein 2 OS=Rattus norvegicus GN=Gemin2 PE=2 SV=1
4.0E-98 [12..265] [1..269]
gi|114652752 - gi|114652752|ref|XP_001146059.1| PREDICTED: SMN-interacting protein 1 isoform 3 [Pan troglodytes]
gi|119586234 - gi|119586234|gb|EAW65830.1| survival of motor neuron protein interacting protein 1, isoform CRA_f [H...
8.0E-96 [1..265] [1..257]
gi|156717376, gi... - gi|156717376|ref|NP_001096228.1| hypothetical protein LOC100124782 [Xenopus (Silurana) tropicalis], ...
7.0E-92 [18..265] [2..267]
GEMI2_XENLA - Gem-associated protein 2 OS=Xenopus laevis GN=gemin2 PE=2 SV=1
1.0E-91 [25..265] [1..259]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRAELAGLK TMAWVPAESA VEELMPRLLP VEPCDLTEGF DPSVPPRTPQ EYLRRVQIEA  60
   61 AQCPDVVVAQ IDPKKLKRKQ SVNISLSGCQ PAPEGYSPTL QWQQQQVAQF STVRQNVNKH 120
  121 RSHWKSQQLD SNVTMPKSED EEGWKKFCLG EKLCADGAVG PATNESPGID YVQATVTSVL 180
  181 EYLSNWFG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERDFTPELGR WLYALLACLE KPLLPEAHSL IRQLARRCSE VRLLVDSKDD ERVPALNLLI  60
   61 CLVSRYFDQR DLADEPS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle