YRC Public Data Repository - Protein Structure Prediction

Protein:	C16orf61
Organism:	Homo sapiens
Length:	79 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C16orf61.

Description	E-value	Query Range	Subject Range
gi\|76639958 - gi\|76639958\|ref\|XP_870510.1\| PREDICTED: similar to UPF0287 protein DC13 [Bos taurus]	117.0	[0..1]	[78..230]
CE30625 - status:Confirmed UniProt:Q8MNU7 protein_id:AAM22045.1	101.0	[0..1]	[79..1]
COXM2_MOUSE - COX assembly mitochondrial protein 2 homolog OS=Mus musculus GN=Cmc2 PE=3 SV=1	100.0	[0..1]	[77..1]
gi\|114663888 - gi\|114663888\|ref\|XP_511125.2\| PREDICTED: similar to DC13 [Pan troglodytes]	97.0	[0..1]	[51..313]
gi\|50795800 - gi\|50795800\|ref\|XP_423810.1\| PREDICTED: similar to RIKEN cDNA 1110046L09 [Gallus gallus]	96.0	[0..1]	[73..176]
gi\|73957295 - gi\|73957295\|ref\|XP_538264.2\| PREDICTED: similar to UPF0287 protein DC13 [Canis familiaris]	92.0	[0..1]	[79..1]
gi\|159130492 - gi\|159130492\|gb\|EDP55605.1\| conserved hypothetical protein [Aspergillus fumigatus A1163] gi\|70990326, gi\|... - gi\|70990326\|ref\|XP_750012.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668476...	91.0	[0..12]	[77..74]

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Predicted Domain #1

Region A:
Residues: [1-79]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPDLSPHLH TEECNVLINL LKECHKNHNI LKFFGYCNDV DRELRKCLKN EYVENRTKSR  60
   61 EHGIAMRKKL FNPPEESEK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	36.30103
Match:	PF08583.1
Description:	No description for PF08583.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits