YRC Public Data Repository - Protein Structure Prediction

Protein:	YWHAQ
Organism:	Homo sapiens
Length:	245 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YWHAQ.

Description	E-value	Query Range	Subject Range
gi\|109087133 - gi\|109087133\|ref\|XP_001098275.1\| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase activa...	0.0	[1..245]	[334..578]
gi\|68436321 - gi\|68436321\|ref\|XP_699659.1\| PREDICTED: similar to tyrosine 3-monooxygenase/tryptophan 5-monooxygena...	0.0	[1..245]	[1532..1775]
gi\|114621209 - gi\|114621209\|ref\|XP_528202.2\| PREDICTED: similar to YWHAZ protein [Pan troglodytes]	0.0	[1..245]	[138..382]
gi\|30354619 - gi\|30354619\|gb\|AAH51814.1\| YWHAZ protein [Homo sapiens]	0.0	[1..245]	[76..320]
gi\|17017334 - gi\|17017334\|gb\|AAL33624.1\|AF440230_1 protein kinase A activity reporter 1 fusion protein [synthetic ...	0.0	[1..234]	[232..465]
gi\|76630316 - gi\|76630316\|ref\|XP_874865.1\| PREDICTED: similar to 14-3-3 protein theta (14-3-3 protein tau) (14-3-3...	0.0	[1..226]	[165..390]
gi\|51593617 - gi\|51593617\|gb\|AAH80802.1\| Ywhaq protein [Mus musculus]	0.0	[1..245]	[21..265]

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Predicted Domain #1

Region A:
Residues: [1-245]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKTELIQKA KLAEQAERYD DMATCMKAVT EQGAELSNEE RNLLSVAYKN VVGGRRSAWR  60
   61 VISSIEQKTD TSDKKLQLIK DYREKVESEL RSICTTVLEL LDKYLIANAT NPESKVFYLK 120
  121 MKGDYFRYLA EVACGDDRKQ TIDNSQGAYQ EAFDISKKEM QPTHPIRLGL ALNFSVFYYE 180
  181 ILNNPELACT LAKTAFDEAI AELDTLNEDS YKDSTLIMQL LRDNLTLWTS DSAGEECDAA 240
  241 EGAEN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	109.0
Match:	2btpA
Description:	14-3-3 Protein Theta (Human) Complexed to Peptide
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits