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View Structure Prediction Details

Protein: gi|89031517
Organism: Homo sapiens
Length: 141 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|89031517.

Description E-value Query
Range
Subject
Range
gi|114577766 - gi|114577766|ref|XP_001167206.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
185.0 [0..1] [141..54]
gi|89033493, gi|... - gi|89033493|ref|XP_941540.1| PREDICTED: similar to nuclear DNA-binding protein [Homo sapiens], gi|23...
177.0 [0..1] [141..1]
C1D_BOVIN - Nuclear nucleic acid-binding protein C1D OS=Bos taurus GN=C1D PE=2 SV=1
175.0 [0..1] [140..1]
gi|109103210 - gi|109103210|ref|XP_001093680.1| PREDICTED: similar to nuclear DNA-binding protein [Macaca mulatta]
175.0 [0..1] [141..1]
gi|73970225 - gi|73970225|ref|XP_855373.1| PREDICTED: similar to nuclear DNA-binding protein [Canis familiaris]
172.0 [0..1] [140..15]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEEINEDY PVEIHDYLSA FANSIDAVDE MLKNMMSVSR NELLQKLDPL EQAKVDLVSA  60
   61 YTLNSMFWVY LATQGVNPKE HPVKQELERI RVYMNRVKEI TDKKKAGKLD RGAASRFVRN 120
  121 ALWEPKPKNT SKVAHKGKSK S

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 24.958607
Match: PF04000.6
Description: No description for PF04000.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.962 N/A N/A a.121.1 Tetracyclin repressor-like, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle