YRC Public Data Repository - Protein Structure Prediction

Protein:	PC
Organism:	Homo sapiens
Length:	1178 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PC.

Description	E-value	Query Range	Subject Range
gi\|56419614, gi\|... - gi\|56419614\|ref\|YP_146932.1\| pyruvate carboxylase [Geobacillus kaustophilus HTA426], gi\|56379456\|dbj...	0.0	[34..1177]	[3..1145]
PYC_BOVIN - Pyruvate carboxylase, mitochondrial OS=Bos taurus GN=PC PE=2 SV=2	0.0	[1..1178]	[1..1178]
gi\|228654461, gi... - gi\|229129224\|ref\|ZP_04258197.1\| Pyruvate carboxylase [Bacillus cereus BDRD-Cer4], gi\|228654461\|gb\|EE... gi\|229111417, gi... - gi\|229111417\|ref\|ZP_04240969.1\| Pyruvate carboxylase [Bacillus cereus Rock1-15], gi\|228672033\|gb\|EEL... gi\|228702243, gi... - gi\|229081199\|ref\|ZP_04213709.1\| Pyruvate carboxylase [Bacillus cereus Rock4-2], gi\|228702243\|gb\|EEL5... gi\|228723709, gi... - gi\|229047633\|ref\|ZP_04193221.1\| Pyruvate carboxylase [Bacillus cereus AH676], gi\|228723709\|gb\|EEL750... gi\|30022035, gi\|... - gi\|30022035\|ref\|NP_833666.1\| pyruvate carboxylase [Bacillus cereus ATCC 14579], gi\|29897591\|gb\|AAP10... gi\|229146518, gi... - gi\|229146518\|ref\|ZP_04274889.1\| Pyruvate carboxylase [Bacillus cereus BDRD-ST24], gi\|228637151\|gb\|EE...	0.0	[35..1178]	[5..1147]
gi\|47557102, gi\|... - gi\|47565822\|ref\|ZP_00236861.1\| pyruvate carboxylase [Bacillus cereus G9241], gi\|47557102\|gb\|EAL15431...	0.0	[35..1178]	[5..1147]
gi\|89202981, gi\|... - gi\|89202981\|ref\|ZP_01181683.1\| Pyruvate carboxylase [Bacillus cereus subsp. cytotoxis NVH 391-98], g...	0.0	[35..1178]	[5..1147]
gi\|51975010, gi\|... - gi\|52141541\|ref\|YP_085288.1\| pyruvate carboxylase [Bacillus cereus E33L], gi\|51975010\|gb\|AAU16560.1\|...	0.0	[35..1178]	[5..1147]
gi\|49330018, gi\|... - gi\|49478462\|ref\|YP_038009.1\| pyruvate carboxylase [Bacillus thuringiensis serovar konkukian str. 97-...	0.0	[35..1178]	[5..1147]
gi\|42783042, gi\|... - gi\|42783042\|ref\|NP_980289.1\| pyruvate carboxylase [Bacillus cereus ATCC 10987], gi\|42738969\|gb\|AAS42...	0.0	[35..1178]	[5..1147]

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Predicted Domain #1

Region A:
Residues: [1-1178]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKFRTVHGG LRLLGIRRTS TAPAASPNVR RLEYKPIKKV MVANRGEIAI RVFRACTELG  60
   61 IRTVAIYSEQ DTGQMHRQKA DEAYLIGRGL APVQAYLHIP DIIKVAKENN VDAVHPGYGF 120
  121 LSERADFAQA CQDAGVRFIG PSPEVVRKMG DKVEARAIAI AAGVPVVPGT DAPITSLHEA 180
  181 HEFSNTYGFP IIFKAAYGGG GRGMRVVHSY EELEENYTRA YSEALAAFGN GALFVEKFIE 240
  241 KPRHIEVQIL GDQYGNILHL YERDCSIQRR HQKVVEIAPA AHLDPQLRTR LTSDSVKLAK 300
  301 QVGYENAGTV EFLVDRHGKH YFIEVNSRLQ VEHTVTEEIT DVDLVHAQIH VAEGRSLPDL 360
  361 GLRQENIRIN GCAIQCRVTT EDPARSFQPD TGRIEVFRSG EGMGIRLDNA SAFQGAVISP 420
  421 HYDSLLVKVI AHGKDHPTAA TKMSRALAEF RVRGVKTNIA FLQNVLNNQQ FLAGTVDTQF 480
  481 IDENPELFQL RPAQNRAQKL LHYLGHVMVN GPTTPIPVKA SPSPTDPVVP AVPIGPPPAG 540
  541 FRDILLREGP EGFARAVRNH PGLLLMDTTF RDAHQSLLAT RVRTHDLKKI APYVAHNFSK 600
  601 LFSMENWGGA TFDVAMRFLY ECPWRRLQEL RELIPNIPFQ MLLRGANAVG YTNYPDNVVF 660
  661 KFCEVAKENG MDVFRVFDSL NYLPNMLLGM EAAGSAGGVV EAAISYTGDV ADPSRTKYSL 720
  721 QYYMGLAEEL VRAGTHILCI KDMAGLLKPT ACTMLVSSLR DRFPDLPLHI HTHDTSGAGV 780
  781 AAMLACAQAG ADVVDVAADS MSGMTSQPSM GALVACTRGT PLDTEVPMER VFDYSEYWEG 840
  841 ARGLYAAFDC TATMKSGNSD VYENEIPGGQ YTNLHFQAHS MGLGSKFKEV KKAYVEANQM 900
  901 LGDLIKVTPS SKIVGDLAQF MVQNGLSRAE AEAQAEELSF PRSVVEFLQG YIGVPHGGFP 960
  961 EPFRSKVLKD LPRVEGRPGA SLPPLDLQAL EKELVDRHGE EVTPEDVLSA AMYPDVFAHF1020
 1021 KDFTATFGPL DSLNTRLFLQ GPKIAEEFEV ELERGKTLHI KALAVSDLNR AGQRQVFFEL1080
 1081 NGQLRSILVK DTQAMKEMHF HPKALKDVKG QIGAPMPGKV IDIKVVAGAK VAKGQPLCVL1140
 1141 SAMKMETVVT SPMEGTVRKV HVTKDMTLEG DDLILEIE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2qf7A
Description:	No description for 2qf7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits