| Protein: | gi|35167, gi|339... |
| Organism: | Homo sapiens |
| Length: | 463 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|35167, gi|339....
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-41 | [5..346] | [1..305] |
|
|
3.0E-40 | [4..346] | [19..324] |
|
|
3.0E-40 | [5..346] | [1..305] |
|
|
8.0E-40 | [5..349] | [1..308] |
|
|
9.0E-40 | [1..463] | [1..463] |
|
|
2.0E-39 | [1..463] | [1..463] |
|
|
4.0E-39 | [1..463] | [1..463] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MVHSSMGAPE IRMSKPLEAE KQGLDSPSEH TDTERNGPDT NHQNPQNKTS PFSVSPTGPS 60
61 TKIKAEDPSG DSAPAAPLPP QPAQPHLPQA QLMLTGSQLA GDIQQLLQLQ QLVLVPGHHL 120
121 QPPAQFLLPQ AQQSQPGL
|
| Detection Method: |  |
| Confidence: | 1.45 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [139-351] |
1 11 21 31 41 51
| | | | | |
1 LPTPNLFQLP QQTQGALLTS QPRAGLPTQP PKCLEPPSHP EEPSDLEELE QFARTFKQRR 60
61 IKLGFTQGDV GLAMGKLYGN DFSQTTISRF EALNLSFKNM CKLKPLLEKW LNDAETMSVD 120
121 SSLPSPNQLS SPSLGFDGLP GRRRKKRTSI ETNVRFALEK SFLANQKPTS EEILLIAEQL 180
181 HMEKEVIRVW FCNRRQKEKR INPCSAAPML PSP
|
| Detection Method: | |
| Confidence: | 28.221849 |
| Match: | 1cqtA |
| Description: | Oct-1 POU Homeodomain; Oct-1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [352-463] |
1 11 21 31 41 51
| | | | | |
1 GKPASYSPHM VTPQGGAGTL PLSQASSSLS TTVTTLSSAV GTLHPSRTAG GGGGGGGAAP 60
61 PLNSIPSVTP PPPATTNSTN PSPQGSHSAI GLSGLNPSTG PGLWWNPAPY QP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
