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View Structure Prediction Details

Protein: NGRN
Organism: Homo sapiens
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NGRN.

Description E-value Query
Range
Subject
Range
gi|75677385, gi|... - gi|75677385|ref|NP_001028260.2| neugrin [Homo sapiens], gi|119622502|gb|EAX02097.1| neugrin, neurite...
399.0 [0..1] [219..73]
gi|114658870 - gi|114658870|ref|XP_001168675.1| PREDICTED: mesenchymal stem cell protein DSC92 isoform 4 [Pan trogl...
399.0 [0..1] [219..73]
gi|62901956 - gi|62901956|gb|AAY18929.1| DKFZp566L1946 [synthetic construct]
396.0 [0..2] [219..26]
NGRN_PONPY - Neugrin - Pongo pygmaeus (Orangutan)
NGRN_PONAB - Neugrin OS=Pongo abelii GN=NGRN PE=2 SV=1
391.0 [0..1] [219..1]
gi|109082355 - gi|109082355|ref|XP_001096468.1| PREDICTED: similar to mesenchymal stem cell protein DSC92 isoform 2...
385.0 [0..1] [219..73]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAPGAPPRT LTWEAMEQIR YLHEEFPESW SVPRLAEGFD VSTDVIRRVL KSKFLPTLEQ  60
   61 KLKQDQKVLK KAGLAHSLQH LRGSGNTSKL L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.811 N/A N/A a.4.1 Homeodomain-like

Predicted Domain #2
Region A:
Residues: [92-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAGHSVSGSL LMPGHEASSK DPNHSTALKV IESDTHRTNT PRRRKGRNKE IQDLEESFVP  60
   61 VAAPLGHPRE LQKYSSDSES PRGTGSGALP SGQKLEELKA EEPDNFSSKV VQRGREFFDS 120
  121 NGNFLYRI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle