YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE40033
Organism: Caenorhabditis elegans
Length: 113 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40033.

Description E-value Query
Range
Subject
Range
gi|71557703, gi|... - gi|71737150|ref|YP_276466.1| acyl-CoA thioesterase II [Pseudomonas syringae pv. phaseolicola 1448A],...
149.0 [0..1] [111..1]

Back

Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTRPQLISA MLSIDNIDDN IYRSEGPHIG GIFGVNRLFG GYIAGQVYEA VRIYKNKIKD  60
   61 ENVIFSMHYN FVSAGDPRKL IDIKIEKVGN VYTADVYHEN KKIGLAHIKV RKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.30103
Match: 1c8uA
Description: Thioesterase II (TesB)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.215996736903871 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle