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View Structure Prediction Details

Protein: sgca-1
Organism: Caenorhabditis elegans
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sgca-1.

Description E-value Query
Range
Subject
Range
sgca-1 - status:Confirmed UniProt:O76633 protein_id:AAK39242.3
708.0 [0..1] [348..111]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVINLVEDS LYQGNTQQVF ELPINGLDVE DLVSNRDRKI SQLENSLRNT FRGRNVNPYI  60
   61 AGVRSRYIIP RGKEHIFKNS FGTMVYVGTQ QKFYPGTMSI VHNLQTMPEF CSNPSSVVMN 120
  121 KYFAPTFPVD WCNVAVRNIS SLEGEGIDEL IKDEQEEKLT KANPDQNLNE KPEQPPRELY 180
  181 GYSEHGFSIV LFAIILGVSI LFVFALVLIF FGSREGQKWR DDKTSGETLG EFISIRD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [238-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQKKLRELSL QRQLLSMGPD TNSTAPSGIH SYLQSRSRAP STSIARFSKS ASRLNDKEDT  60
   61 IELLPSVDHV PVGKQTVAEA AKQCGSSLHL YRNPLSNESD EQDTESSDED N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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