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View Structure Prediction Details

Protein: inx-22
Organism: Caenorhabditis elegans
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-22.

Description E-value Query
Range
Subject
Range
gi|124020689 - gi|124020689|gb|ABM88790.1| innexin 2 [Bombyx mandarina]
gi|112984532, gi... - gi|112984532|ref|NP_001037203.1| innexin 2 [Bombyx mori], gi|110611088|gb|AAR97567.2| innexin 2 [Bom...
409.0 [0..2] [382..4]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSAIDKLI RPFLQLHEWD NGAERIVHTT TIQILICFGF LVSSNMMFGQ PITCLMLPET  60
   61 PDSSANYFHD FCFYQDKLRI PPLHNAVKRS TRQGTMNINN IMPQEVAVTY YQWTPFIIFL 120
  121 QVAMCLVPAL MWKFF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [136-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLHYFYGHDF AAIVRSLASK KKDDKMDSSN SNYEVDARET LRWLEHKKRE RFGMHTTMMI  60
   61 YVAMKWMTFA SLLFQFNLMA KIYASGELLW GVHISYELLN GAYKNVYTGV FPQIVGCNPH 120
  121 RAQLGGVVNE FIMRCILPQN FVNSKVFLFL YWWYILAMLV SIYSAVQFTA MLFLPKYQRY 180
  181 ATKSLLPTEE FFNEHAEKPT KGSLEFFVDY MGNDGYLLLQ CASVPLSVVR IRFFLNSLYT 240
  241 IVVEKKKEYE DQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [388-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPMVPRKQKT PIDHIQFDGP DRSGTKGPYK NGKAMIMSDG DSYTKQLLSH SSPSCSPASS  60
   61 QRYSAAPGKN LEDYE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle