| Protein: | C1QA |
| Organism: | Homo sapiens |
| Length: | 245 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C1QA.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-42 | [2..241] | [82..323] |
|
|
1.0E-35 | [1..245] | [1..245] |
|
|
1.0E-35 | [1..245] | [1..245] |
|
|
1.0E-35 | [1..245] | [1..245] |
|
|
3.0E-35 | [11..242] | [24..239] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MEGPRGWLVL CVLAISLASM VTEDLCRAPD GKKGEAGRPG RRGRPGLKGE QGEPGAPGIR 60
61 TGIQGLKGDQ GEPGPSGNPG KVGYPGPSGP LGARGIPGIK GTKGSPGNIK DQPRPAFSAI 120
121 RRNPPMGGNV VIFDTVITNQ EEPYQNHSGR FVCTVPGYYY FTFQVLSQ
|
| Detection Method: |  |
| Confidence: | 14.0 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [169-245] |
1 11 21 31 41 51
| | | | | |
1 WEICLSIVSS SRGQVRRSLG FCDTTNKGLF QVVSGGMVLQ LQQGDQVWVE KDPKKGHIYQ 60
61 GSEADSVFSG FLIFPSA
|
| Detection Method: | |
| Confidence: | 26.0 |
| Match: | 1pk6A |
| Description: | Globular Head of the Complement System Protein C1q |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| tumor necrosis factor receptor superfamily binding | 3.27382150819697 | bayes_pls_golite062009 |
| receptor binding | 2.87092342030082 | bayes_pls_golite062009 |
| cytokine activity | 2.15273244126886 | bayes_pls_golite062009 |
| binding | 1.56262702810355 | bayes_pls_golite062009 |
| cell surface binding | 1.12145675554147 | bayes_pls_golite062009 |
| protein binding | 1.103851389575 | bayes_pls_golite062009 |
| tumor necrosis factor receptor binding | 0.83659914028185 | bayes_pls_golite062009 |
| CD40 receptor binding | 0.817940383456736 | bayes_pls_golite062009 |
| eukaryotic cell surface binding | 0.3981620493951 | bayes_pls_golite062009 |
