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View Structure Prediction Details

Protein: ROCK1
Organism: Homo sapiens
Length: 1354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ROCK1.

Description E-value Query
Range
Subject
Range
gi|73961936 - gi|73961936|ref|XP_537305.2| PREDICTED: similar to Rho-associated protein kinase 1 (Rho-associated, ...
624.0 [0..1] [1353..670]
gi|50737091 - gi|50737091|ref|XP_419151.1| PREDICTED: similar to corneal epithelial Rho-associated-ser/thr kinase;...
614.0 [0..1] [1354..611]
ROCK1_RAT - Rho-associated protein kinase 1 OS=Rattus norvegicus GN=Rock1 PE=1 SV=1
492.0 [0..1] [1354..1]
gi|162318270, gi... - gi|162319602|gb|AAI56986.1| Rho-associated coiled-coil containing protein kinase 1 [synthetic constr...
ROCK1_MOUSE - Rho-associated protein kinase 1 OS=Mus musculus GN=Rock1 PE=1 SV=1
488.0 [0..1] [1354..1]
gi|114672510 - gi|114672510|ref|XP_001151928.1| PREDICTED: Rho-associated, coiled-coil containing protein kinase 1 ...
488.0 [0..1] [1354..1]
gi|109121747, gi... - gi|109121747|ref|XP_001091266.1| PREDICTED: Rho-associated, coiled-coil containing protein kinase 1 ...
486.0 [0..1] [1354..1]

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Predicted Domain #1
Region A:
Residues: [1-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGDSFETR FEKMDNLLRD PKSEVNSDCL LDGLDALVYD LDFPALRKNK NIDNFLSRYK  60
   61 DTINKIRDLR MKAEDYEVVK VIGRGAFGEV QLVRHKSTRK VYAMKLLSKF EMIKRSDSAF 120
  121 FWEERDIMAF ANSPWVVQLF YAFQDDRYLY MVMEYMPGGD LVNLMSNYDV PEKWARFYTA 180
  181 EVVLALDAIH SMGFIHRDVK PDNMLLDKSG HLKLADFGTC MKMNKEGMVR CDTAVGTPDY 240
  241 ISPEVLKSQG GDGYYGRECD WWSVGVFLYE MLVGDTPFYA DSLVGTYSKI MNHKNSLTFP 300
  301 DDNDISKEAK NLICAFLTDR EVRLGRNGVE EIKRHLFFKN DQWAWETLRD TVAPVVPDLS 360
  361 SDIDTSNFDD LEEDKGEEET FPIPKAFVGN QLPFVGFTYY SNRRYLSSAN PNDNRTSSNA 420
  421 DKSLQESLQK TIYKLEEQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.045757
Match: 2esmA
Description: Crystal Structure of ROCK 1 bound to fasudil
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [440-836]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HNEMQLKDEM EQKCRTSNIK LDKIMKELDE EGNQRRNLES TVSQIEKEKM LLQHRINEYQ  60
   61 RKAEQENEKR RNVENEVSTL KDQLEDLKKV SQNSQLANEK LSQLQKQLEE ANDLLRTESD 120
  121 TAVRLRKSHT EMSKSISQLE SLNRELQERN RILENSKSQT DKDYYQLQAI LEAERRDRGH 180
  181 DSEMIGDLQA RITSLQEEVK HLKHNLEKVE GERKEAQDML NHSEKEKNNL EIDLNYKLKS 240
  241 LQQRLEQEVN EHKVTKARLT DKHQSIEEAK SVAMCEMEKK LKEEREAREK AENRVVQIEK 300
  301 QCSMLDVDLK QSQQKLEHLT GNKERMEDEV KNLTLQLEQE SNKRLLLQNE LKTQAFEADN 360
  361 LKGLEKQMKQ EINTLLEAKR LLEFELAQLT KQYRGNE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [837-978]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQMRELQDQL EAEQYFSTLY KTQVKELKEE IEEKNRENLK KIQELQNEKE TLATQLDLAE  60
   61 TKAESEQLAR GLLEEQYFEL TQESKKAASR NRQEITDKDH TVSRLEEANS MLTKDIEILR 120
  121 RENEELTEKM KKAEEEYKLE KE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.78
Match: 1jchA
Description: Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [979-1147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEISNLKAAF EKNINTERTL KTQAVNKLAE IMNRKDFKID RKKANTQDLR KKEKENRKLQ  60
   61 LELNQEREKF NQMVVKHQKE LNDMQAQLVE ECAHRNELQM QLASKESDIE QLRAKLLDLS 120
  121 DSTSVASFPS ADETDGNLPE SRIEGWLSVP NRGNIKRYGW KKQYVVVSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #5
Region A:
Residues: [1148-1219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKILFYNDEQ DKEQSNPSMV LDIDKLFHVR PVTQGDVYRA ETEEIPKIFQ ILYANEGECR  60
   61 KDVEMEPVQQ AE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 2coaA
Description: Solution structure of the PH domain of protein kinase C, D2 type from human
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [1220-1278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTNFQNHKGH EFIPTLYHFP ANCDACAKPL WHVFKPPPAL ECRRCHVKCH RDHLDKKED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 1tbnA
Description: NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
Matching Structure (courtesy of the PDB):

Predicted Domain #7
Region A:
Residues: [1279-1354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LICPCKVSYD VTSARDMLLL ACSQDEQKKW VTHLVKKIPK NPPSGFVRAS PRTLSTRSTA  60
   61 NQSFRKVVKN TSGKTS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.0
Match: 1btkA
Description: Bruton's tyrosine kinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle