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View Structure Prediction Details

Protein: spe-19
Organism: Caenorhabditis elegans
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spe-19.

Description E-value Query
Range
Subject
Range
CE34113 - WBGene00013747 locus:spe-19 status:Partially_confirmed TR:Q9U2Y6 protein_id:CAB60482.2
587.0 [0..14] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIFFLFFKF LKTMAENGEM KYLECYTTKE VIYDKFPKFT LEGEHTTIAT YNITHESKTG  60
   61 PPACVMFFGT NGTHSATWQG HVSSFALPLE CHINSKSYTH CFKSPNPFVF LELPNGWACC 120
  121 CSGHNCNWHN PSFFQFFERF ILDNSELFNR LKAVCKYSFC IVFCVFITIL WTIVEVLLTN 180
  181 LCEKRRKTCE ESEFEMRNKI PSSLQLQPTQ SSLKSRSGKN LSEMSLHPGS TLKVEKTQED 240
  241 DVTEPKRSEL EVASTQRSRI NKDDDFVPIP EKPEWQTTKN GRLRRTSMNY EESTYSVLQE 300
  301 

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle