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View Structure Prediction Details

Protein: egl-9
Organism: Caenorhabditis elegans
Length: 647 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-9.

Description E-value Query
Range
Subject
Range
egl-9 - status:Confirmed UniProt:O45918 protein_id:CAA94893.2
513.0 [0..1] [647..77]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICKSLQTSG MVPSNLMPQA APAVMAPIPP TVSFDDPALT TSLLLSLQNN PILNQTISNF  60
   61 PPTFSITSKT EPEPSIPIQI PQRISSTSTV PFSSEGSAFK PYRNTHVFNS ISSESMSSMC 120
  121 TSHEASLEHM SSASLAMFPT SSTAQSDISR LAQVLSLAGD SPASLALVTT SVPSTASTAT 180
  181 IPPPATTTSS ATSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [195-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKSETITVGK EKIIQTDDPD IQIIETEGGS KPTVSRTRKR PTPSNSADPK INYKDHNKNV  60
   61 VYSTTLQEHQ KHLQNRGLAL SIHQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [279-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AMVLRLRYIA EHVIRSLNEF GWAVVDNFLG SDHYKFTAKE IERLYERGLF SPGQLMEAKH  60
   61 KDEFHIKDIR SDHIYWYDGY DGRAKDAATV RLLISMIDSV IQHFKKRIDH DIGGRSRAML 120
  121 AIYPGNGTRY VKHVDNPVKD GRCITTIYYC NENWDMATDG GTLRLYPETS MTPMDIDPRA 180
  181 DRLVFFWSDR RNPHEVMPVF RHRFAITIWY MDKSERDKAL AKGKESDAAC ASKKEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.221849
Match: 2hbtA
Description: No description for 2hbtA was found.

Predicted Domain #4
Region A:
Residues: [515-647]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPTSSSLNSL IGSLLRPRKN PSTHDLSKLD LRLFPSTSSD PALVSAADED RVDISADFQS  60
   61 TSSLAHPEST DSGVSLSTFN VAHNHMERTT SLQSISDHFR SERSHERRSS TSSDQDLDEG 120
  121 LPPPPSTNPE YYI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle