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View Structure Prediction Details

Protein: IPI:IPI00182562....
Organism: Homo sapiens
Length: 441 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPI:IPI00182562.....

Description E-value Query
Range
Subject
Range
gi|73996557 - gi|73996557|ref|XP_850166.1| PREDICTED: similar to keratin, hair, basic, 3 [Canis familiaris]
3.0E-82 [8..411] [124..528]
gi|46485106, gi|... - gi|57012376|ref|NP_001008813.1| type II keratin Kb23 [Rattus norvegicus], gi|46485106|tpg|DAA02222.1...
1.0E-79 [8..398] [26..417]
gi|109096771 - gi|109096771|ref|XP_001093676.1| PREDICTED: keratin, hair, basic, 4 [Macaca mulatta]
2.0E-78 [3..398] [75..478]
KRT81_BOVIN - Keratin, type II cuticular Hb1 OS=Bos taurus GN=KRT81 PE=2 SV=1
3.0E-77 [8..411] [28..432]
KRT84 - keratin 84
1.0E-76 [3..398] [75..478]

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Predicted Domain #1
Region A:
Residues: [1-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STCSHQFTSS RSMKGSCSIG GSIRGGSSRI SSVLAGGSCH APSTYGGLCV SFSRFSFGGA  60
   61 CGLGGGYGGG FGSSSSFASG FGGGYEKVTM QHLSDRLASY LDKVRALEEA NADLEVKIRD 120
  121 WYQRQRPSEI KDCSPYFKTI EDLRHKIIAA TIENAQPILQ IDNARLAADD FRTNYEHELA 180
  181 LRQTVEAGVN GLCRVLDELT LARTDLEMQM EGLKEELAYL RKNHEEEMLA LRGQTGGEVN 240
  241 VEMDAAPGVD LSCILNEMRN QYEQMAKHNH RDAAWFLSKT KELNKKVASS SELVQSSRSE 300
  301 VTLLQRVFQG LEMELQSQLS IKASLENSLE ETKGCYCMQP SQIQGLIGSV EEQLAQLCCE 360
  361 MEQQSREYQI LLDMKTRLEQ EIATYRRLLE GEDAHLSSPH ASGQSCSSRV VFTSSSSSSN 420
  421 RQTWPILKEQ GSSSFSQGQC S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle