YRC Public Data Repository - Protein Structure Prediction

Protein:	TYW3
Organism:	Homo sapiens
Length:	259 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TYW3.

Description	E-value	Query Range	Subject Range
gi\|109008486 - gi\|109008486\|ref\|XP_001100269.1\| PREDICTED: hypothetical protein [Macaca mulatta]	4.0E-93	[1..259]	[1..258]
TYW3_PONPY - tRNA wybutosine-synthesizing protein 3 homolog - Pongo pygmaeus (Orangutan) TYW3_PONAB - tRNA wybutosine-synthesizing protein 3 homolog OS=Pongo abelii GN=TYW3 PE=2 SV=1	1.0E-92	[1..259]	[1..258]
TYW3_MOUSE - tRNA wybutosine-synthesizing protein 3 homolog OS=Mus musculus GN=Tyw3 PE=1 SV=1	1.0E-92	[1..258]	[1..256]
gi\|114557204 - gi\|114557204\|ref\|XP_001167649.1\| PREDICTED: tRNA-yW synthesizing protein 3 homolog isoform 2 [Pan tr...	3.0E-91	[1..259]	[1..259]
TYW3 - tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	6.0E-91	[1..259]	[1..259]
TYW3_PIG - tRNA wybutosine-synthesizing protein 3 homolog OS=Sus scrofa GN=TYW3 PE=2 SV=1	9.0E-83	[1..259]	[1..259]
TYW3_BOVIN - tRNA wybutosine-synthesizing protein 3 homolog OS=Bos taurus GN=TYW3 PE=2 SV=1	1.0E-81	[1..259]	[1..258]

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Predicted Domain #1

Region A:
Residues: [1-259]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSAEFRKW KAQCLSKADL SRKGSVDEDV VELVQFLNMR DQFFTTSSCA GRILLLDRGI  60
   61 NGFEVQKQNC CWLLVTHKLC VKDDVIVALK KANGDATLKF EPFVLHVQCR QLQDAQILHS 120
  121 MAIDSGFRNS GITVGKRGKT MLAVRSTHGL EVPLSHKGKL MVTEEYIDFL LNVANQKMEE 180
  181 NKKRIERFYN CLQHALERET MTNLHPKIKE KNNSSYIHKK KRNPEKTRAQ CITKESDEEL 240
  241 ENDDDDDLGI NVTIFPEDY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	67.69897
Match:	2drvA
Description:	No description for 2drvA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits