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View Structure Prediction Details

Protein: UGGG_ARATH
Organism: Arabidopsis thaliana
Length: 1613 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for UGGG_ARATH.

Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTTTNLRSW LYLILLFIVV VGVNAQNRRP KNVQVAVKAK WQGTPLLLEA GELISKESKQ  60
   61 LFWEFTDAWL GSDGDDSDCK SARDCLLKIS KQASTLLAQP VASLFHFSLT LRSASPRLVL 120
  121 YRQLADESLS SFPHGDDPSA TGCCWVDTGS SLFYDVADLQ SWLASAPAVG DAVQGPELFD 180
  181 FDHVHFDSRA GSPVAVLYGA VGTDCFRKFH LSLAKAAKEG KVTYVVRPVL PLGCEGKTRP 240
  241 CGAIGARDNV SLAGYGVELA LKNMEYKAMD DSAIKKG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [278-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITLEDPRTED LSQDVRGFIF SKILDRKPEL RSEVMAFRDY LLSSTVSDTL DVWELKDLGH  60
   61 QTAQRIVHAS DPLQSMQEIN QNFPSVVSSL SR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [370-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNESIKDE ILSNQRMVPP GKALLALNGA LLNIEDIDLY MLMDLAHQEL SLANHFSKLK  60
   61 IPDGAIRKLL LTTPLPEPDS YRVDFRSVHV TYLNNLEEDD MYKRWRSNIN EILMPAFPGQ 120
  121 LRYIRKNLFH AVYVIDPATA CGLESIETLR SLYENQLPVR FGVILYSTQL IK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [542-734]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIENNGGQIP SSDAVTNAQV KEDLSTMVIR LFLYIKEHHG IQTAFQFLGN LNTLRTESAD  60
   61 SSEADIEQEH VDGAFVETIL PKVKTLPQDI LLKLRQEHTL KEASEASSMF VFKLGLAKLK 120
  121 CSFLMNGLVF DSVEEETLLN AMNEELPKIQ EQVYYGQIES HTKVLDKLLS ESGLSRYNPQ 180
  181 IISGGKNKPR FVS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [735-821]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LASSTRKGES MLNDVNYLHS PETSEDVKYV THLLAADVAT KKGMKLLHEG VRYLIGGSKS  60
   61 ARLGVLFSSS QNADPHSLLF IKFFEKT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [822-1057]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASSFSHKEKV LYFLDKLCLF YEREYLLKTS VESASSQMFI DKVLELADEY GLSSKAYRSC  60
   61 LVESVDEELL KRLTKVAQFL SWELGLESDA NAIISNGRVI FPVDERTFLG QDLHLLESME 120
  121 FNQRVKPVQE IIEGIEWQDV DPDLLTSKYF SDVFMFVSSA MATRDRSSES ARFEVLNSEY 180
  181 SAVLLGNENA TIHIDAVIDP LSPTGQKLAS LLQVLQKHVQ TSMRIVLNPM SSLVDI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1058-1282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLKNYYRYVL PNTDDYSSTG FDVDGPKAFF ANMPLSKTLT MNLDVPEPWL VEPVIAIHDL  60
   61 DNILLENLGD TTTLQAVFEV ESLVLTGHCA EKDHEAPRGL QLILGTKNRP HLVDTLVMAN 120
  121 LGYWQMKVSP GVWYLQLAPG RSSELYALKG GNDGSQDQSS LKRITIDDLR GKVVHLEVVK 180
  181 RKGKEHEKLL VPSDGDDAVQ QNKEGSWNSN FLKWASGFVG GRQQS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1283-1613]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGPDKEHE KGGRQGKTIN IFSIASGHLY ERFLKIMILS VLKNTNRPVK FWFIKNYLSP  60
   61 QFKDVIPHMA QEYNFEYELI TYKWPSWLHK QKEKQRIIWA YKILFLDVIF PLSLEKVIFV 120
  121 DADQIIRTDM GELYDMDIKG RPLAYTPFCD NNREMDGYKF WKQGFWKEHL RGRPYHISAL 180
  181 YVVDLVKFRE TAAGDNLRVF YETLSKDPNS LSNLDQDLPN YAQHTVPIFS LPQEWLWCES 240
  241 WCGNATKAKA RTIDLCNNPM TKEPKLQGAR RIVTEWPDLD LEARKFTAKI LGEDVELNEP 300
  301 VAAPATDKPN PLPSNDISED TEQDLESKAE L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.39794
Match: 1zctA
Description: structure of glycogenin truncated at residue 270 in a complex with UDP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle