YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: HOL1_ARATH
Organism: Arabidopsis thaliana
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for HOL1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEQQNSDQ SNGGNVIPTP EEVATFLHKT VEEGGWEKCW EEEITPWDQG RATPLIVHLV  60
   61 DTSSLPLGRA LVPGCGGGHD VVAMASPERF VVGLDISESA LAKANETYGS SPKAEYFSFV 120
  121 KEDVFTWRPT ELFDLIFDYV FFCAIEPEMR PAWAKSMYEL LKPDGELITL MYPITDHVGG 180
  181 PPYKVDVSTF EEVLVPIGFK AVSVEENPHA IPTRQREAGK VEEDQLIPKK EILLFGKSVI 240
  241 CVIYKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 1kp9A
Description: CmaA1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle