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View Structure Prediction Details

Protein: CE40184
Organism: Caenorhabditis elegans
Length: 176 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40184.

Description E-value Query
Range
Subject
Range
gi|37360618 - gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
203.0 [0..1] [176..49]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPDPTSYDR VFKFLIFGGK SVGKKTLLRS FCTEGDNESI WTSLTVDDEK VLIEATVSQK  60
   61 WEEGMSKEHD AIALVFSTTD VYSFEYTLEL YNEIQKSTER IPLVFIENKI DIVEDSQMDK 120
  121 GLVEGEMRKK HKRLYRVSAL KEFNVMHPFA YLIEKLTRQK KDLNANESVS ENSLRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.39794
Match: 2folA
Description: Crystal structure of human RAB1A in complex with GDP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.470983068319171 bayes_pls_golite062009
hydrolase activity 0.0582794297634999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle