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View Structure Prediction Details

Protein: CE40177
Organism: Caenorhabditis elegans
Length: 499 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40177.

Description E-value Query
Range
Subject
Range
gi|68369440 - gi|68369440|ref|XP_682785.1| PREDICTED: similar to solute carrier family 41, member 1 isoform 1 [Dan...
318.0 [0..1] [497..44]

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Predicted Domain #1
Region A:
Residues: [1-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAPRSSPV SPEEQSTQES SPNDSYVPRS TLRSSDEEPK SILELYTPKI LTSMETVADE  60
   61 EAENVPETMC EIFSQSLVPF FLGGCGSISA GLLLTYANKT MTLVKEVPEF LVLMPPLQGL 120
  121 RGNLDMTFSS RMSTLAHKGE FNEPDIYLRV RKNAAVAQAL SILICILTNL ISYCIVQITP 180
  181 SLDNPTLANS TSLQSIHNDT YHYLDNKETA LFLTGSSILS VALNCAICTT FLFTIVYCAW 240
  241 KNDYNPDNIV APLGASISDM LTIGSMLFFC YLLRPYSGFS SSVPVVI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.0
Match: 2yvxA
Description: No description for 2yvxA was found.

Predicted Domain #2
Region A:
Residues: [288-499]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVVAACSIPL WIMIAWNDED ALRIAKQQCF TLAFAAMVSC GAGLLQSKGA MTYPNYPAYQ  60
   61 TLISGLAGNR GAVLASRISS HLEVHKTSDL GWRQRASPIS YYRSASSESR TARLLLFTAL 120
  121 PFQMFFVGLS TAMSFVIDEP VETDFRFFIA YALVVLIQQS TILYLAQLIV FAFWSFGIDP 180
  181 DNHAIPLLTS AADVCGCGLL YLLFLSLDKG FR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.82
Match: 2yvxA
Description: No description for 2yvxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle