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View Structure Prediction Details

Protein: CE40140
Organism: Caenorhabditis elegans
Length: 232 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40140.

Description E-value Query
Range
Subject
Range
gi|187032392, gi... - gi|39580726|emb|CAE64112.1| Hypothetical protein CBG08721 [Caenorhabditis briggsae], gi|187032392|em...
gi|157748477 - gi|157748477|ref|XP_001669333.1| Hypothetical protein CBG08721 [Caenorhabditis briggsae AF16]
215.0 [0..1] [232..28]

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Predicted Domain #1
Region A:
Residues: [1-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFGNASVD IDMLEQEMAA EQTANLSGNI AGMSAPKSSS NRRGPMQEVD LDAEFDTLEE  60
   61 PVWDTVKRDV LTVGAKFTHV VLPHGDKQQL LRDWDLWGPL FICVGLALLL QHNGGTESAP 120
  121 QFTQVFTITF FGSVIVTANI KLLGGNISFF QSLCVIGYCL LPPFVAAVLC SLFLHGIAFP 180
  181 LRLLITSIGF VWSTYASMGF LAGCQPDKKR LLVIYPVFLF YFVVSWMIIS HS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 57.022276
Match: PF04893.8
Description: No description for PF04893.8 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle