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View Structure Prediction Details

Protein: CE40131
Organism: Caenorhabditis elegans
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40131.

Description E-value Query
Range
Subject
Range
FUT1 - fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)
365.0 [0..10] [371..7]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLYKLHHLI WFCVVFGIIC NILVVLKISR DARNFKCFQK IQKVVEKLLL LQFVEPIYVS  60
   61 EVIEKESPEI PEIYNK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLQTMLFSFV TDGIGNKLFE VISLLGIAKT LKRRPVINAT NPDYMQVLYA DIQPLFPKLV  60
   61 EQFSLELIPD HFITRERISW GKCCMFDDPK KLQSLKDQYL ILEGHYFQSY KFFHHLRSQI 120
  121 RDWLAPSKRM ALKAAAVIPE KSKNDFIICT HIHRGEPPYN NHRKPSDPRF TRVATEYLVD 180
  181 IYEKSHSRIS VVVLGDDLNF VNEVFTQSIK SNTSSYTVIT VPILKPEIDL AISRIFCDVF 240
  241 LLTAPTSTFG WWLAYLAKKE AVIYYRDIED SKDEVLRELE PVDYYPKEWR TLKTDKDGSI 300
  301 RL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.045757
Match: 2hhcA
Description: No description for 2hhcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle