| Protein: | gi|2792366 |
| Organism: | Homo sapiens |
| Length: | 873 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2792366.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [19..863] | [3..850] |
|
|
0.0 | [42..863] | [26..852] |
|
|
0.0 | [17..863] | [1..847] |
|
|
0.0 | [40..863] | [156..979] |
|
|
0.0 | [17..863] | [1..847] |
|
|
0.0 | [46..863] | [29..859] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 LSLFGSRALG RSGARAMAKA KKVGARRKAS GAPAGARGGP AKANSNPFEV KVNRQKFQIL 60
61 GRKTRHDVGL PGVSRARALR KRTQTLLKEY KERDKSNVFR DKRFGEYNSN MSPEEKMMKR 120
121 FALEQQRHHE KKSIYNLNED EELTHYGQSL ADIEKHNDIV DSDSDAEDRG TLSAELTAAH 180
181 FGGGGGLLHK KTQQEGEERE KPKSRKELIE ELIAKSKQEK RERQAQREDA LELTEKLDQD 240
241 WKEIQTLLSH KTPKSENRDK KEKPKPDAYD MMVRELGFEM KAQPSNRMKT EAELAKEEQE 300
301 HLRKLEAERL RRMLGKDEDE NVKKPKHMSA DDLNDGFVLD K
|
| Detection Method: |  |
| Confidence: | 21.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [342-556] |
1 11 21 31 41 51
| | | | | |
1 DDRRLLSYKD GKMNVEEDVQ EEQSKEASDP ESNEEEGDSS GGEDTEESDS PDSHLDLESN 60
61 VESEEENEKP AKEQRQTPGK GLISGKERAG KATRDELPYT FAAPESYEEL RSLLLGRSME 120
121 EQLLVVERIQ KCNHPSLAEG NKAKLEKLFG FLLEYVGDLA TDDPPDLTVI DKLVVHLYHL 180
181 CQMFPESASD AIKFVLRDAM HEMEEMIETK GRAAL
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [557-675] |
1 11 21 31 41 51
| | | | | |
1 PGLDVLIYLK ITGLLFPTSD FWHPVVTPAL VCLSQLLTKC PILSLQDVVK GLFVCCLFLE 60
61 YVALSQRFIP ELINFLLGIL YIATPNKASQ GSTLVHPFRA LGKNSELLVV SAREDVATW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [676-873] |
1 11 21 31 41 51
| | | | | |
1 QQSSLSLRWA SRLRAPTSTE ANHIRLSCLA VGLALLKRCV LMYGSLPSFH AIMGPLQALL 60
61 TDHLADCSHP QELQELCQST LTEMESQKQL CRPLTCEKSK PVPLKLFTPR LVKVLEFGRK 120
121 QGSSKEEQER KRLIHKHKRE FKGAVREIRK DNQFLARMQL SEIMERDAER KRKVKQLFNS 180
181 LATQEGEWKA LKRKKFKK
|
| Detection Method: | |
| Confidence: | 1.01 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
