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View Structure Prediction Details

Protein: KIAA0090
Organism: Homo sapiens
Length: 993 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KIAA0090.

Description E-value Query
Range
Subject
Range
gi|52545969 - gi|52545969|emb|CAH56140.1| hypothetical protein [Homo sapiens]
0.0 [1..993] [1..993]
gi|108998548 - gi|108998548|ref|XP_001091700.1| PREDICTED: similar to CG2943-PA isoform 2 [Macaca mulatta]
0.0 [1..993] [1..993]
gi|114554424 - gi|114554424|ref|XP_001162981.1| PREDICTED: similar to KIAA0090 [Pan troglodytes]
0.0 [1..993] [1..992]
EMC1_PONAB - ER membrane protein complex subunit 1 OS=Pongo abelii GN=EMC1 PE=2 SV=1
K0090_PONPY - Uncharacterized protein KIAA0090 homolog precursor - Pongo pygmaeus (Orangutan)
0.0 [1..993] [1..996]
gi|109475725, gi... - gi|157822661|ref|NP_001102160.1| hypothetical protein LOC362643 [Rattus norvegicus], gi|149024425|gb...
0.0 [1..993] [1..993]
gi|37359768 - gi|37359768|dbj|BAC97862.1| mKIAA0090 protein [Mus musculus]
0.0 [6..993] [1..992]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEWASRFW LWATLLIPAA AVYEDQVGKF DWRQQYVGKV KFASLEFSPG SKKLVVATEK  60
   61 NVIAALNSRT GEILWRHVDK GTAEGAVDAM LLHGQDVITV SNGGRIMRSW ETNIGGLNWE 120
  121 ITLDSGSFQA LGLVGLQESV RYIAVLKKTT LALHHLSSGH LKWVEHLPES DSIHYQMVYS 180
  181 Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 1kv9A
Description: Quinoprotein alcohol dehydrogenase, C-terminal domain; Quinoprotein alcohol dehydrogenase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.869619296732501 bayes_pls_golite062009
oxidoreductase activity 0.0799712629603699 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [182-873]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSGVVWALGV VPFSHVNIVK FNVEDGEIVQ QVRVSTPWLQ HLSGACGVVD EAVLVCPDPS  60
   61 SRSLQTLALE TEWELRQIPL QSLDLEFGSG FQPRVLPTQP NPVDASRAQF FLHLSPSHYA 120
  121 LLQYHYGTLS LLKNFPQTAL VSFATTGEKT VAAVMACRNE VQKSSSSEDG SMGSFSEKSS 180
  181 SKDSLACFNQ TYTINLYLVE TGRRLLDTTI TFSLEQSGTR PERLYIQVFL KKDDSVGYRA 240
  241 LVQTEDHLLL FLQQLAGKVV LWSREESLAE VVCLEMVDLP LTGAQAELEG EFGKKADGLL 300
  301 GMFLKRLSSQ LILLQAWTSH LWKMFYDARK PRSQIKNEIN IDTLARDEFN LQKMMVMVTA 360
  361 SGKLFGIESS SGTILWKQYL PNVKPDSSFK LMVQRTTAHF PHPPQCTLLV KDKESGMSSL 420
  421 YVFNPIFGKW SQVAPPVLKR PILQSLLLPV MDQDYAKVLL LIDDEYKVTA FPATRNVLRQ 480
  481 LHELAPSIFF YLVDAEQGRL CGYRLRKDLT TELSWELTIP PEVQRIVKVK GKRSSEHVHS 540
  541 QGRVMGDRSV LYKSLNPNLL AVVTESTDAH HERTFIGIFL IDGVTGRIIH SSVQKKAKGP 600
  601 VHIVHSENWV VYQYWNTKAR RNEFTVLELY EGTEQYNATA FSSLDRPQLP QVLQQSYIFP 660
  661 SSISAMEATI TERGITSRHL LIGLPSGAIL SL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.15
Match: 1w6sA
Description: The high resolution structure of methanol dehydrogenase from methylobacterium extorquens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.771354814754693 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [874-993]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKALLDPRRP EIPTEQSREE NLIPYSPDVQ IHAERFINYN QTVSRMRGIY TAPSGLESTC  60
   61 LVVAYGLDIY QTRVYPSKQF DVLKDDYDYV LISSVLFGLV FATMITKRLA QVKLLNRAWR 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 1lrwA
Description: Crystal structure of methanol dehydrogenase from P. denitrificans
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle