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View Structure Prediction Details

Protein: OTUD6B
Organism: Homo sapiens
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OTUD6B.

Description E-value Query
Range		 Subject
Range
gi|109476175, gi... - gi|157820311|ref|NP_001100109.1| OTU domain containing 6B [Rattus norvegicus], gi|149045466|gb|EDL98...
 1.0E-60 [1..293] [32..324]
gi|57108027 - gi|57108027|ref|XP_544171.1| PREDICTED: similar to CG7857-PA [Canis familiaris]
 6.0E-60 [17..293] [115..391]
gi|76630286 - gi|76630286|ref|XP_874339.1| PREDICTED: similar to CG7857-PA [Bos taurus]
 1.0E-57 [1..293] [1..293]
gi|109086925 - gi|109086925|ref|XP_001086186.1| PREDICTED: similar to OTU domain containing 6B [Macaca mulatta]
 2.0E-57 [1..293] [1..293]
gi|74186199, gi|... - gi|74186368|dbj|BAE42955.1| unnamed protein product [Mus musculus], gi|74186199|dbj|BAE42895.1| unna...
 6.0E-56 [1..293] [1..294]
gi|4929625 - gi|4929625|gb|AAD34073.1|AF151836_1 CGI-77 protein [Homo sapiens]
 2.0E-51 [1..288] [1..288]

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Predicted Domain #1
Region A:
Residues: [1-153] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVLTEELD EEEQLLRRHR KEKKELQAKI QGMKNAVPKN DKKRRKQLTE DVAKLEKEME  60
   61 QKHREELEQL KLTTKENKID SVAVNISNLV LENQPPRISK AQKRREKKAA LEKEREERIA 120
  121 EAEIENLTGA RHMESEKLAQ ILAARQLEIK QIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 1dkxA
Description: DnaK
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [154-293] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDGHCMYKAI EDQLKEKDCA LTVVALRSQT AEYMQSHVED FLPFLTNPNT GDMYTPEEFQ  60
   61 KYCEDIVNTA AWGGQLELRA LSHILQTPIE IIQADSPPII VGEEYSKKPL ILVYMRHAYG 120
  121 LGEHYNSVTR LVNIVTENCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 1tffA
Description: Structure of Otubain-2
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle