| Protein: | gi|6331192 |
| Organism: | Homo sapiens |
| Length: | 835 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6331192.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..835] | [118..952] |
|
|
0.0 | [1..835] | [125..959] |
|
|
0.0 | [2..835] | [87..922] |
|
|
0.0 | [5..835] | [1..831] |
|
|
0.0 | [5..835] | [1..834] |
|
|
0.0 | [5..835] | [1..833] |
|
|
0.0 | [325..835] | [1..511] |
|
|
3.0E-89 | [4..835] | [75..963] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 GKIEMKVHMH TKFCLICLLT FIFHHCNHCH EEHDHGPEAL HRQHRGMTEL EPSKFSKQAA 60
61 ENEKKYYIEK LFERYGENGR LSFFG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.493 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.421 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.382 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.370 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.334 | a.2.3 | Chaperone J-domain |
|
Region A: Residues: [86-393] |
1 11 21 31 41 51
| | | | | |
1 LEKLLTNLGL GERKVVEINH EDLGHDHVSH LDILAVQEGK HFHSHNHQHS HNHLNSENQT 60
61 VTSVSTKRNH KCDPEKETVE VSVKSDDKHM HDHNHRLRHH HRLHHHLDHN NTHHFHNDSI 120
121 TPSERGEPSN EPSTETNKTQ EQSDVKLPKG KRKKKGRKSN ENSEVITPGF PPNHDQGEQY 180
181 EHNRVHKPDR VHNPGHSHVH LPERNGHDPG RGHQDLDPDN EGELRHTRKR EAPHVKNNAI 240
241 ISLRKDLNED DHHHECLNVT QLLKYYGHGA NSPISTDLFT YLCPALLYQI DSRLCIEHFD 300
301 KLLVEDIN
|
| Detection Method: | |
| Confidence: | 1.45 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [394-568] |
1 11 21 31 41 51
| | | | | |
1 KDKNLVPEDE ANIGASAWIC GIISITVISL LSLLGVILVP IINQGCFKFL LTFLVALAVG 60
61 TMSGDALLHL LPHSQGGHDH SHQHAHGHGH SHGHESNKFL EEYDAVLKGL VALGGIYLLF 120
121 IIEHCIRMFK HYKQQRGKQK WFMKQNTEES TIGRKLSDHK LNNTPDSDWL QLKPL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [569-662] |
1 11 21 31 41 51
| | | | | |
1 AGTDDSVVSE DRLNETELTD LEGQQESPPK NYLCIEEEKI IDHSHSDGLH TIHEHDLHAA 60
61 AHNHHGENKT VLRKHNHQWH HKHSHHSHGP CHSG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.479 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.397 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.338 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.281 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.281 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [663-835] |
1 11 21 31 41 51
| | | | | |
1 SDLKETGIAN IAWMVIMGDG IHNFSDGLAI GAAFSAGLTG GISTSIAVFC HELPHELGDF 60
61 AVLLKAGMTV KQAIVYNLLS AMMAYIGMLI GTAVGQYANN ITLWIFAVTA GMFLYVALVD 120
121 MLPEMLHGDG DNEEHGFCPV GQFILQNLGL LFGFAIMLVI ALYEDKIVFD IQF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
