YRC Public Data Repository - Protein Structure Prediction

Protein:	ALG10
Organism:	Homo sapiens
Length:	473 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG10.

Description	E-value	Query Range	Subject Range
gi\|14349125 - gi\|14349125\|emb\|CAC41349.1\| alpha2-glucosyltransferase [Homo sapiens]	0.0	[1..473]	[1..473]
gi\|114645362 - gi\|114645362\|ref\|XP_001169000.1\| PREDICTED: asparagine-linked glycosylation 10 homolog B isoform 1 [...	0.0	[1..473]	[1..473]
gi\|109096134 - gi\|109096134\|ref\|XP_001086837.1\| PREDICTED: asparagine-linked glycosylation 10 homolog (yeast, alpha...	0.0	[1..473]	[1..473]
gi\|111307510, gi... - gi\|76682180\|ref\|XP_589768.2\| PREDICTED: similar to modifier of the HERG potassium channel isoform 1 ...	0.0	[1..473]	[1..474]
gi\|73997186 - gi\|73997186\|ref\|XP_534842.2\| PREDICTED: similar to modifier of the HERG potassium channel [Canis fam...	0.0	[1..473]	[1..474]
AG10B_RAT - Putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase OS=Rattus norvegicus G...	0.0	[1..473]	[1..474]
AG10B_MOUSE - Putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase OS=Mus musculus GN=Alg...	0.0	[1..473]	[1..474]

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Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLEGYYFS AALSCTFLVS CLLFSAFSRA LREPYMDEIF HLPQAQRYCE GHFSLSQWDP  60
   61 MITTLPGLYL VSIGVIKPAI WIFGWSEHVV CSIGMLRFVN LLFSVGNFYL LYLLFCKVQP 120
  121 RNKA

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [125-221]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASSIQRVLST LTLAVFPTLY FFNFLYYTEA GSMFFTLFAY LMCLYGNHKT SAFLGFCGFM  60
   61 FRQTNIIWAV FCAGNVIAQK LTEAWKTELQ KKEDRLP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [222-388]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIKGPFAEFR KILQFLLAYS MSFKNLSMLL LLTWPYILLG FLFCAFVVVN GGIVIGDRSS  60
   61 HEACLHFPQL FYFFSFTLFF SFPHLLSPSK IKTFLSLVWK RRILFFVVTL VSVFLVWKFT 120
  121 YAHKYLLADN RHYTFYVWKR VFQRYETVKY LLVPAYIFAG WSIADSL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [389-473]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSKSIFWNLM FFICLFTVIV PQKLLEFRYF ILPYVIYRLN IPLPPTSRLI CELSCYAVVN  60
   61 FITFFIFLNK TFQWPNSQDI QRFMW

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits