| Protein: | C16orf42 |
| Organism: | Homo sapiens |
| Length: | 312 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C16orf42.
| Description | E-value | Query Range |
Subject Range |
|
|
511.0 | [0..1] | [312..1] |
|
|
509.0 | [0..1] | [312..1] |
|
|
506.0 | [0..1] | [312..1] |
|
|
450.0 | [0..1] | [312..1] |
|
|
383.0 | [0..24] | [312..24] |
|
|
353.0 | [0..2] | [270..3] |
|
|
350.0 | [0..56] | [266..49] |
|
|
349.0 | [0..1] | [266..9] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MGRRRAARGP GAEGGRPRHL PTRSLEAFAE EVGAALQASV EPGAADGEGG PGPAALPCTL 60
61 AMWELGHCDP RRCTGRKLAR LGLVRCLRLG HRFGGLVLSP VGKQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.428 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.428 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.407 | a.159.3 | Description not found. |
| View | Download | 0.344 | c.47.1 | Thioredoxin-like |
| View | Download | 0.297 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.269 | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.249 | c.95.1 | Thiolase-like |
|
Region A: Residues: [105-239] |
1 11 21 31 41 51
| | | | | |
1 YASPADRQLV AQSGVAVIDC SWARLDETPF GKMRGSHLRL LPYLVAANPV NYGRPYRLSC 60
61 VEAFAATFCI VGFPDLAVIL LRKFKWGKGF LDLNRQLLDK YAACGSPEEV LQAEQEFLAN 120
121 AKESPQEEEI DPFDV
|
| Detection Method: | |
| Confidence: | 71.0 |
| Match: | PF04034.4 |
| Description: | No description for PF04034.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.603 | N/A | N/A | d.20.1 | UBC-like |
| View | Download | 0.581 | N/A | N/A | d.20.1 | UBC-like |
| View | Download | 0.564 | N/A | N/A | a.213.1 | Description not found. |
| View | Download | 0.467 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.452 | N/A | N/A | d.20.1 | UBC-like |
| View | Download | 0.445 | N/A | N/A | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.420 | N/A | N/A | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.383 | N/A | N/A | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.339 | N/A | N/A | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.335 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
|
Region A: Residues: [240-312] |
1 11 21 31 41 51
| | | | | |
1 DSGREFGNPN RPVASTRLPS DTDDSDASED PGPGAERGGA SSSCCEEEQT QGRGAEARAP 60
61 AEVWKGIKKR QRD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
