YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SLC24A2
Organism: Homo sapiens
Length: 661 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLC24A2.

Description E-value Query
Range
Subject
Range
gi|114623874 - gi|114623874|ref|XP_528551.2| PREDICTED: solute carrier family 24 (sodium/potassium/calcium exchange...
0.0 [1..661] [1..661]
gi|109111428 - gi|109111428|ref|XP_001108751.1| PREDICTED: solute carrier family 24 (sodium/potassium/calcium excha...
0.0 [1..661] [1..661]
gi|123858198, gi... - gi|27369563|ref|NP_766014.1| solute carrier family 24 (sodium/potassium/calcium exchanger), member 2...
0.0 [1..661] [1..666]
NCKX2_RAT - Sodium/potassium/calcium exchanger 2 OS=Rattus norvegicus GN=Slc24a2 PE=1 SV=1
0.0 [1..661] [1..670]
gi|73971038 - gi|73971038|ref|XP_852036.1| PREDICTED: similar to Sodium/potassium/calcium exchanger 2 precursor (N...
0.0 [1..661] [1..664]
gi|219520100, gi... - gi|6708127|gb|AAF25811.1|AF177987_1 cone sodium-calcium potassium exchanger splice variant [Homo sap...
0.0 [1..661] [1..644]

Back

Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLQQSTTIT SLEKWCLDES LSGCRRHYSV KKKLKLIRVL GLFMGLVAIS TVSFSISAFS  60
   61 ETDTQSTGEA SVVSGPRVAQ GYHQRTLLDL NDKILDYTPQ PPLSKEGESE NSTDHAQGD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPKDIFSLEE RRKGAIILHV IGMIYMFIAL AIVCDEFFVP SLTVITEKLG ISDDVAGATF  60
   61 MAAGGSAPEL FTSLIGVFIA HSNVGIGTIV GSAVFNILFV IGMCALFSRE ILNLTWWPLF 120
  121 RDVSFYIVDL IMLIIFFLDN VIMWWESLLL LTAYFCYVVF MKFNVQVEKW VKQMINR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.79588
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [297-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKVVKVTAPE AQAKPSAARD KDEPTLPAKP RLQRGGSSAS LHNSLMRNSI FQLMIHTLDP  60
   61 LAEELGSYGK LKYYDTMTEE GRFREKASIL HKIAKKKCHV DENERQNGAA NHVEKIELPN 120
  121 STSTDVEMTP SSDASEPVQN GNLSHNIEGA EAQTADEEED QPLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [461-661]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAWPSETRKQ VTFLIVFPIV FPLWITLPDV RKPSSRKFFP ITFFGSITWI AVFSYLMVWW  60
   61 AHQVGETIGI SEEIMGLTIL AAGTSIPDLI TSVIVARKGL GDMAVSSSVG SNIFDITVGL 120
  121 PLPWLLYTVI HRFQPVAVSS NGLFCAIVLL FIMLLFVILS IALCKWRMNK ILGFIMFGLY 180
  181 FVFLVVSVLL EDRILTCPVS I

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 40.148742
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle